Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_05845 and BSU38220
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:27:06
# Commandline: needle
# -asequence dna-align/BSNT_05845___ywcC.1.22522.seq
# -bsequence dna-align/BSU38220___ywcC.2.22522.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_05845___ywcC-BSU38220___ywcC.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_05845___ywcC-BSU38220___ywcC.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05845___ywcC
# 2: BSU38220___ywcC
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 672
# Identity: 669/672 (99.6%)
# Similarity: 669/672 (99.6%)
# Gaps: 0/672 ( 0.0%)
# Score: 3333.0
#
#
#=======================================
BSNT_05845___ 1 ATGAAAAAAAACAAATTTCAAATTAAAAGAGAAGCAACATTTGAAAGTAT 50
||||||||||||||||||||||||||||||||||||||||||||||||.|
BSU38220___yw 1 ATGAAAAAAAACAAATTTCAAATTAAAAGAGAAGCAACATTTGAAAGTTT 50
BSNT_05845___ 51 TATAGACGCTGGCGTGAATTTGTTGATTGACCGAGCGTATGATCCGGTTT 100
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU38220___yw 51 TATAGACGCTGGCGTGAATTTGTTGATTGACCGAGCGTATGATCCGGTTT 100
BSNT_05845___ 101 CTGTAGAAGATATCAGCAGAGCCGCCGGGTACAGCAAAGGAGCATTTTAT 150
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU38220___yw 101 CTGTAGAAGATATCAGCAGAGCCGCCGGGTACAGCAAAGGAGCATTTTAT 150
BSNT_05845___ 151 GTTCATTTTGTCAGCAAGGACGATTTTCTGCTGTACCTTCTCGAAAAACG 200
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU38220___yw 151 GTTCATTTTGTCAGCAAGGACGATTTTCTGCTGTACCTTCTCGAAAAACG 200
BSNT_05845___ 201 TCAGATGAAAAAAAAGATCATTATAGGGTATCTTGATCAAATGGAGCGGG 250
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU38220___yw 201 TCAGATGAAAAAAAAGATCATTATAGGGTATCTTGATCAAATGGAGCGGG 250
BSNT_05845___ 251 AGTCAGTGAAATCGCTGACATTGGACGAGGCTGCAAAACACGCTGCAGAA 300
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU38220___yw 251 AGTCAGTGAAATCGCTGACATTGGACGAGGCTGCAAAACACGCTGCAGAA 300
BSNT_05845___ 301 CTGCTTTATTCCTATTACATAAATAAGCCGTCGTGGGACATCACCTCGTT 350
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU38220___yw 301 CTGCTTTATTCCTATTACATAAATAAGCCGTCGTGGGACATCACCTCGTT 350
BSNT_05845___ 351 TGCCATGAACATGCCGACATATAAAGTCTTAAAGAAATGCAAGGCCTATG 400
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU38220___yw 351 TGCCATGAACATGCCGACATATAAAGTCTTAAAGAAATGCAAGGCCTATG 400
BSNT_05845___ 401 TCCGGCTGTACGAATTGTGGGTGGAAGAAAATGTGTTATATATTAAGTGG 450
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU38220___yw 401 TCCGGCTGTACGAATTGTGGGTGGAAGAAAATGTGTTATATATTAAGTGG 450
BSNT_05845___ 451 CTGAAGGAGAGAAAGCTGATTGACGCCTGTATTGATCCTGAATATACGGC 500
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU38220___yw 451 CTGAAGGAGAGAAAGCTGATTGACGCCTGTATTGATCCTGAATATACGGC 500
BSNT_05845___ 501 TAAAATAATATGTGCAGTCCTCGACGGAATCATTAAACAATCATATGTAT 550
|||||||||||||||||||||||||||||||||.||||||||||||||||
BSU38220___yw 501 TAAAATAATATGTGCAGTCCTCGACGGAATCATCAAACAATCATATGTAT 550
BSNT_05845___ 551 TGGGCCAGCCAGCCACCTTCCGCAGCTTTTTAGACGCACTCTCGGTATTT 600
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU38220___yw 551 TGGGCCAGCCAGCCACCTTCCGCAGCTTTTTAGACGCACTCTCGGTATTT 600
BSNT_05845___ 601 TTTACTTTAGACAGAGAGCACGAGACGCCAAGAATTTTGAAAAGTTTTTC 650
|||||||||||||||||||||||||.||||||||||||||||||||||||
BSU38220___yw 601 TTTACTTTAGACAGAGAGCACGAGAGGCCAAGAATTTTGAAAAGTTTTTC 650
BSNT_05845___ 651 AGAAAGCGAGGAACATCAGTGA 672
||||||||||||||||||||||
BSU38220___yw 651 AGAAAGCGAGGAACATCAGTGA 672
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