Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_05844 and BSU38210

See Amino acid alignment / Visit BSNT_05844 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:27:06
# Commandline: needle
#    -asequence dna-align/BSNT_05844___ywcD.1.22522.seq
#    -bsequence dna-align/BSU38210___ywcD.2.22522.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_05844___ywcD-BSU38210___ywcD.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_05844___ywcD-BSU38210___ywcD.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05844___ywcD
# 2: BSU38210___ywcD
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 384
# Identity:     384/384 (100.0%)
# Similarity:   384/384 (100.0%)
# Gaps:           0/384 ( 0.0%)
# Score: 1920.0
# 
#
#=======================================

BSNT_05844___      1 ATGTATATCATTATGGGGGTTTTCACAACCATTGTGAATATCGCCAGCTT     50
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU38210___yw      1 ATGTATATCATTATGGGGGTTTTCACAACCATTGTGAATATCGCCAGCTT     50

BSNT_05844___     51 TTATATATTGGTAGAGATCATGAATGTGGATTACAAAGCCGCCACTGTTG    100
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU38210___yw     51 TTATATATTGGTAGAGATCATGAATGTGGATTACAAAGCCGCCACTGTTG    100

BSNT_05844___    101 CCGCTTGGATTTTGTCCGTGCTGTTTGCTTACATAACAAATAAATTATAT    150
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU38210___yw    101 CCGCTTGGATTTTGTCCGTGCTGTTTGCTTACATAACAAATAAATTATAT    150

BSNT_05844___    151 GTGTTTCAGCAAAAAACACATGATCTGCAGAGCCTGCTGAAAGAGCTCAC    200
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU38210___yw    151 GTGTTTCAGCAAAAAACACATGATCTGCAGAGCCTGCTGAAAGAGCTCAC    200

BSNT_05844___    201 TGCTTTTTTCAGCGTTCGGGTCCTGTCTCTCGGCATAGATTTAGGCATGA    250
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU38210___yw    201 TGCTTTTTTCAGCGTTCGGGTCCTGTCTCTCGGCATAGATTTAGGCATGA    250

BSNT_05844___    251 TGATCATTCTTGTCGGCCAGTTCAATACAAATGAAACCTTGGCCAAAATA    300
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU38210___yw    251 TGATCATTCTTGTCGGCCAGTTCAATACAAATGAAACCTTGGCCAAAATA    300

BSNT_05844___    301 CTCGACAACGCGGTCATTGTTGTCGTCAACTATGTTGCGAGCAAATGGCT    350
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU38210___yw    301 CTCGACAACGCGGTCATTGTTGTCGTCAACTATGTTGCGAGCAAATGGCT    350

BSNT_05844___    351 CGTCTTTAAAAAAACAAAAGAAGAAGGGGTATGA    384
                     ||||||||||||||||||||||||||||||||||
BSU38210___yw    351 CGTCTTTAAAAAAACAAAAGAAGAAGGGGTATGA    384


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