Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_05839 and BSU38180

See Amino acid alignment / Visit BSNT_05839 in genome browser / Return to Orthologue table
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# Program: needle
# Rundate: Mon  8 Mar 2010 06:27:05
# Commandline: needle
#    -asequence dna-align/BSNT_05839.1.22522.seq
#    -bsequence dna-align/BSU38180___ywzA.2.22522.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_05839-BSU38180___ywzA.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_05839-BSU38180___ywzA.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05839
# 2: BSU38180___ywzA
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 249
# Identity:     246/249 (98.8%)
# Similarity:   246/249 (98.8%)
# Gaps:           3/249 ( 1.2%)
# Score: 1230.0
# 
#
#=======================================

BSNT_05839         1 ATGATGAGTTTTCTTATTTCACTTATCGTCGCTATTATTATCGGATGGCT     50
                        |||||||||||||||||||||||||||||||||||||||||||||||
BSU38180___yw      1 ---ATGAGTTTTCTTATTTCACTTATCGTCGCTATTATTATCGGATGGCT     47

BSNT_05839        51 TGGAAGCCTGTTTGTAAAAGGAGATATGCCCGGAGGAATTATCGGGTCTA    100
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU38180___yw     48 TGGAAGCCTGTTTGTAAAAGGAGATATGCCCGGAGGAATTATCGGGTCTA     97

BSNT_05839       101 TGATCGCAGGTCTTATAGGCGCCTGGATCGGACACGGGCTGCTTGGAACA    150
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU38180___yw     98 TGATCGCAGGTCTTATAGGCGCCTGGATCGGACACGGGCTGCTTGGAACA    147

BSNT_05839       151 TGGGGGCCGCACCTAGCCGGATTTGCCATTATTCCAGCGGTAATCGGCGC    200
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU38180___yw    148 TGGGGGCCGCACCTAGCCGGATTTGCCATTATTCCAGCGGTAATCGGCGC    197

BSNT_05839       201 AGCCATTGTTGTCTTTCTAGTAAGCCTGTTAACCAGAAAAAGAGGATAA    249
                     |||||||||||||||||||||||||||||||||||||||||||||||||
BSU38180___yw    198 AGCCATTGTTGTCTTTCTAGTAAGCCTGTTAACCAGAAAAAGAGGATAA    246


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