Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_05837 and BSU38170

See Amino acid alignment / Visit BSNT_05837 in genome browser / Return to Orthologue table
########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:27:05
# Commandline: needle
#    -asequence dna-align/BSNT_05837___qoxA.1.22522.seq
#    -bsequence dna-align/BSU38170___qoxA.2.22522.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_05837___qoxA-BSU38170___qoxA.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_05837___qoxA-BSU38170___qoxA.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05837___qoxA
# 2: BSU38170___qoxA
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 966
# Identity:     953/966 (98.7%)
# Similarity:   953/966 (98.7%)
# Gaps:           9/966 ( 0.9%)
# Score: 4749.0
# 
#
#=======================================

BSNT_05837___      1 ---------TTGTTCAGAGCATTAAAACCGTTGCTTGTATTAGCGCTGTT     41
                              |||||||||||||||||||||||||||||||||||||||||
BSU38170___qo      1 GTGATCTTCTTGTTCAGAGCATTAAAACCGTTGCTTGTATTAGCGCTGTT     50

BSNT_05837___     42 AACTGTGGTTTTCGTCCTTGGGGGATGCAGCAATGCTTCAGTACTAGATC     91
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU38170___qo     51 AACTGTGGTTTTCGTCCTTGGGGGATGCAGCAATGCTTCAGTACTAGATC    100

BSNT_05837___     92 CGAAAGGACCTGTAGCTGAACAGCAAAGTGATTTAATCCTGTTATCTATC    141
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU38170___qo    101 CGAAAGGACCTGTAGCTGAACAGCAAAGTGATTTAATCCTGTTATCTATC    150

BSNT_05837___    142 GGATTTATGCTGTTTATCGTCGGGGTCGTCTTTGTTCTATTTACCATTAT    191
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU38170___qo    151 GGATTTATGCTGTTTATCGTCGGGGTCGTCTTTGTTCTATTTACCATTAT    200

BSNT_05837___    192 TTTAGTAAAATACCGCGACCGTAAAGGCAAAGATAATGGATCTTATAACC    241
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU38170___qo    201 TTTAGTAAAATACCGCGACCGTAAAGGCAAAGATAATGGATCTTATAACC    250

BSNT_05837___    242 CAGAAATTCACGGTAACACGTTTTTAGAAGTAGTCTGGACAGTGATCCCA    291
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU38170___qo    251 CAGAAATTCACGGTAACACGTTTTTAGAAGTAGTCTGGACAGTGATCCCA    300

BSNT_05837___    292 ATTTTAATCGTCATTGCACTTTCTGTGCCAACAGTACAGACGATATATTC    341
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU38170___qo    301 ATTTTAATCGTCATTGCACTTTCTGTGCCAACAGTACAGACGATATATTC    350

BSNT_05837___    342 GTTAGAAAAAGCTCCTGAAGCAACAAAAGACAAAGAGCCTCTTGTTGTTT    391
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU38170___qo    351 GTTAGAAAAAGCTCCTGAAGCAACAAAAGACAAAGAGCCTCTTGTTGTTT    400

BSNT_05837___    392 ATGCTACTTCGGTAGACTGGAAATGGGTATTCAGCTACCCTGAACAGGAT    441
                     |||||||||||||||||||||||||||||||.||||||||||||||||||
BSU38170___qo    401 ATGCTACTTCGGTAGACTGGAAATGGGTATTTAGCTACCCTGAACAGGAT    450

BSNT_05837___    442 ATTGAAACGGTCAACTACTTAAACATTCCTGTCGACCGCCCGATCTTGTT    491
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU38170___qo    451 ATTGAAACGGTCAACTACTTAAACATTCCTGTCGACCGCCCGATCTTGTT    500

BSNT_05837___    492 CAAAATCTCATCTGCAGATTCAATGGCTTCGCTATGGATTCCTCAGCTTG    541
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU38170___qo    501 CAAAATCTCATCTGCAGATTCAATGGCTTCGCTATGGATTCCTCAGCTTG    550

BSNT_05837___    542 GAGGACAAAAATATGCGATGGCAGGAATGCTGATGGATCAATACTTACAG    591
                     ||||.|||||||||||||||||||||||||||||||||||||||||||||
BSU38170___qo    551 GAGGGCAAAAATATGCGATGGCAGGAATGCTGATGGATCAATACTTACAG    600

BSNT_05837___    592 GCTGACAAAGTGGGTACTTACGAAGGCCGCAACGCGAACTTCACAGGTGA    641
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU38170___qo    601 GCTGACAAAGTGGGTACTTACGAAGGCCGCAACGCGAACTTCACAGGTGA    650

BSNT_05837___    642 ACACTTTGCAGACCAAGAGTTTGATGTGAATGCAGTCACAGAAAAAGACT    691
                     |||.||||||||||||||||||||||||||||||||||||||||||||||
BSU38170___qo    651 ACATTTTGCAGACCAAGAGTTTGATGTGAATGCAGTCACAGAAAAAGACT    700

BSNT_05837___    692 TTAACAGCTGGGTGAAAAAGACTCAGAACGAGGCTCCTAAGCTGACAAAA    741
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU38170___qo    701 TTAACAGCTGGGTGAAAAAGACTCAGAACGAGGCTCCTAAGCTGACAAAA    750

BSNT_05837___    742 GAGAAGTATGATGAATTGATGCTTCCTGAAAATGTGGACGAATTAACGTT    791
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU38170___qo    751 GAGAAGTATGATGAATTGATGCTTCCTGAAAATGTGGACGAATTAACGTT    800

BSNT_05837___    792 CTCTTCTACTCACTTGAAATACGTTGATCACGGACAAGACGCTGAGTACG    841
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU38170___qo    801 CTCTTCTACTCACTTGAAATACGTTGATCACGGACAAGACGCTGAGTACG    850

BSNT_05837___    842 CGATGGAGGCGCGCAAACGCCTTGGCTATCAAGCCGTTTCACCGCACTCT    891
                     ||||||||||||||||||||||||||||||||||||||||||||||.|||
BSU38170___qo    851 CGATGGAGGCGCGCAAACGCCTTGGCTATCAAGCCGTTTCACCGCATTCT    900

BSNT_05837___    892 AAAACAGATCCGTTTGAAAACGTAAAGAAAAACGAATTTAAGAAGTCTGA    941
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU38170___qo    901 AAAACAGATCCGTTTGAAAACGTAAAGAAAAACGAATTTAAGAAGTCTGA    950

BSNT_05837___    942 TGATACAGAAGAATGA    957
                     ||||||||||||||||
BSU38170___qo    951 TGATACAGAAGAATGA    966


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