Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_05833 and BSU38140

See Amino acid alignment / Visit BSNT_05833 in genome browser / Return to Orthologue table
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# Program: needle
# Rundate: Mon  8 Mar 2010 06:27:04
# Commandline: needle
#    -asequence dna-align/BSNT_05833___qoxD.1.22522.seq
#    -bsequence dna-align/BSU38140___qoxD.2.22522.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_05833___qoxD-BSU38140___qoxD.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_05833___qoxD-BSU38140___qoxD.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05833___qoxD
# 2: BSU38140___qoxD
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 375
# Identity:     375/375 (100.0%)
# Similarity:   375/375 (100.0%)
# Gaps:           0/375 ( 0.0%)
# Score: 1875.0
# 
#
#=======================================

BSNT_05833___      1 ATGGCAAACAAATCTGCTGAACACAGTCACTTTCCATGGAAACACATTGT     50
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU38140___qo      1 ATGGCAAACAAATCTGCTGAACACAGTCACTTTCCATGGAAACACATTGT     50

BSNT_05833___     51 AGGTTTTATCCTGTCTATCGTTTTGACCCTGCTGGCTCTATGGGTTGCAG    100
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU38140___qo     51 AGGTTTTATCCTGTCTATCGTTTTGACCCTGCTGGCTCTATGGGTTGCAG    100

BSNT_05833___    101 TGTATACTGACCTGAGCTCATCAGCAAAACTTTGGATTATCTTCGGCTTC    150
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU38140___qo    101 TGTATACTGACCTGAGCTCATCAGCAAAACTTTGGATTATCTTCGGCTTC    150

BSNT_05833___    151 GCCTTCATTCAGGCGGCGCTGCAGCTTCTCATGTTCATGCATATGACAGA    200
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU38140___qo    151 GCCTTCATTCAGGCGGCGCTGCAGCTTCTCATGTTCATGCATATGACAGA    200

BSNT_05833___    201 GAGCGAAAACGGCACGATCCAAGTCGGAAACACGCTGTTCGGATTCTTTG    250
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU38140___qo    201 GAGCGAAAACGGCACGATCCAAGTCGGAAACACGCTGTTCGGATTCTTTG    250

BSNT_05833___    251 GCGCGATCGTTATCGTACTTGGATCCATCTGGATTTTCGCGGCTCACTAT    300
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU38140___qo    251 GCGCGATCGTTATCGTACTTGGATCCATCTGGATTTTCGCGGCTCACTAT    300

BSNT_05833___    301 CACCATGGTGACCATATGGACGGAAATCCTCCTGGAGGCGCTGAACACTC    350
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU38140___qo    301 CACCATGGTGACCATATGGACGGAAATCCTCCTGGAGGCGCTGAACACTC    350

BSNT_05833___    351 AGAGCATTCAGGCCATAACGAATAA    375
                     |||||||||||||||||||||||||
BSU38140___qo    351 AGAGCATTCAGGCCATAACGAATAA    375


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