Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_05825 and BSU38090
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:27:04
# Commandline: needle
# -asequence dna-align/BSNT_05825___vpr.1.22522.seq
# -bsequence dna-align/BSU38090___vpr.2.22522.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_05825___vpr-BSU38090___vpr.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_05825___vpr-BSU38090___vpr.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05825___vpr
# 2: BSU38090___vpr
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 2421
# Identity: 2393/2421 (98.8%)
# Similarity: 2393/2421 (98.8%)
# Gaps: 0/2421 ( 0.0%)
# Score: 11853.0
#
#
#=======================================
BSNT_05825___ 1 TTGAAAAAGGGGATCATTCGCTTTCTGCTTGTAAGTTTTGTCTTATTTTT 50
||||||||||||||||||||||||||||||||||||||.|||||||||||
BSU38090___vp 1 TTGAAAAAGGGGATCATTCGCTTTCTGCTTGTAAGTTTCGTCTTATTTTT 50
BSNT_05825___ 51 TGCGTTATCCACAGGTATTACGGGCGTCCAGGCAGCTCCGGCTTCTTCAA 100
|||||||||||||||.|||||||||||.||||||||||||||||||||||
BSU38090___vp 51 TGCGTTATCCACAGGCATTACGGGCGTTCAGGCAGCTCCGGCTTCTTCAA 100
BSNT_05825___ 101 AAACGTCGGCTGATCTGGAAAAAGCCGAGGTATTCGGTGATATCGACATG 150
||||||||||||||||||||||||||||||||||||||||||||||.|||
BSU38090___vp 101 AAACGTCGGCTGATCTGGAAAAAGCCGAGGTATTCGGTGATATCGATATG 150
BSNT_05825___ 151 ACGACAAGCAAAAAAACAACCGTTATAGTGGAATTAAAAGAAAAATCCTT 200
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU38090___vp 151 ACGACAAGCAAAAAAACAACCGTTATAGTGGAATTAAAAGAAAAATCCTT 200
BSNT_05825___ 201 GGCAGAAGCGAAGGAAGCGGGAGAAAGCCAATCGAAAAGCAAGCTGAAAA 250
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU38090___vp 201 GGCAGAAGCGAAGGAAGCGGGAGAAAGCCAATCGAAAAGCAAGCTGAAAA 250
BSNT_05825___ 251 CCGCTCGCACCAAAGCAAAAAATAAAGCAATCAAAGCGGTGAAAAACGGA 300
||||||||||||||||||||||.||||||||||||||.||||||||||||
BSU38090___vp 251 CCGCTCGCACCAAAGCAAAAAACAAAGCAATCAAAGCAGTGAAAAACGGA 300
BSNT_05825___ 301 AAAGTAAACCGGGAATATGAGCAGGTATTCTCAGGCTTCTCTATGAAGCT 350
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU38090___vp 301 AAAGTAAACCGGGAATATGAGCAGGTATTCTCAGGCTTCTCTATGAAGCT 350
BSNT_05825___ 351 TCCAGCTAATGAGATTCCAAAACTTCTCGCGGTAAAAGACGTTAAGGCGG 400
|||||||||||||||||||||||||||.||||||||||||||||||||.|
BSU38090___vp 351 TCCAGCTAATGAGATTCCAAAACTTCTAGCGGTAAAAGACGTTAAGGCAG 400
BSNT_05825___ 401 TGTACCCGAACGTCACATATAAAACAGACAATATGAAGGATAAAGACGTC 450
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU38090___vp 401 TGTACCCGAACGTCACATATAAAACAGACAATATGAAGGATAAAGACGTC 450
BSNT_05825___ 451 ACAATCTCCGAAGACGCCGTATCTCCGCAAATGGATGACAGTGCGCCTTA 500
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU38090___vp 451 ACAATCTCCGAAGACGCCGTATCTCCGCAAATGGATGACAGTGCGCCTTA 500
BSNT_05825___ 501 TATCGGAGCAAACGATGCATGGGATTTAGGCTACACAGGAAAAGGCATTA 550
||||||||||||||||||||||||||||||||||||||||||||||||.|
BSU38090___vp 501 TATCGGAGCAAACGATGCATGGGATTTAGGCTACACAGGAAAAGGCATCA 550
BSNT_05825___ 551 AGGTGGCGATTATTGACACTGGGGTTGAATACAATCACCCAGATCTGAAG 600
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU38090___vp 551 AGGTGGCGATTATTGACACTGGGGTTGAATACAATCACCCAGATCTGAAG 600
BSNT_05825___ 601 AAAAACTTTGGACAATATAAAGGATACGATTTTGTGGACAATGATTACGA 650
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU38090___vp 601 AAAAACTTTGGACAATATAAAGGATACGATTTTGTGGACAATGATTACGA 650
BSNT_05825___ 651 TCCAAAAGAAACACCAACAGGCGATCCGAGGGGCGGAGCGACTGACCACG 700
||||||||||||||||||.||||||||||||||||..||.||||||||.|
BSU38090___vp 651 TCCAAAAGAAACACCAACCGGCGATCCGAGGGGCGAGGCAACTGACCATG 700
BSNT_05825___ 701 GCACACACGTAGCCGGAACTGTGGCTGCAAACGGAACAATTAAAGGCGTA 750
|||||||||||||||||||||||||||||||||||||.||||||||||||
BSU38090___vp 701 GCACACACGTAGCCGGAACTGTGGCTGCAAACGGAACGATTAAAGGCGTA 750
BSNT_05825___ 751 GCGCCTGATGCCACACTTCTTGCTTATCGTGTGTTAGGGCCTGGCGGAAG 800
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU38090___vp 751 GCGCCTGATGCCACACTTCTTGCTTATCGTGTGTTAGGGCCTGGCGGAAG 800
BSNT_05825___ 801 CGGCACATCGGAAAACGTCATCGCCGGTGTGGAACGTGCAGTGCAGGACG 850
|||||||.||||||||||||||||.||.||||||||||||||||||||||
BSU38090___vp 801 CGGCACAACGGAAAACGTCATCGCGGGCGTGGAACGTGCAGTGCAGGACG 850
BSNT_05825___ 851 GGGCAGATGTGATGAACCTGTCTCTCGGAAACTCTTTAAACAACCCGGAC 900
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU38090___vp 851 GGGCAGATGTGATGAACCTGTCTCTCGGAAACTCTTTAAACAACCCGGAC 900
BSNT_05825___ 901 TGGGCGACAAGCACAGCGCTTGACTGGGCCATGTCAGAAGGCGTTGTCGC 950
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU38090___vp 901 TGGGCGACAAGCACAGCGCTTGACTGGGCCATGTCAGAAGGCGTTGTCGC 950
BSNT_05825___ 951 TGTTACCTCAAACGGCAACAGCGGACCGAACGGCTGGACAGTCGGATCGC 1000
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU38090___vp 951 TGTTACCTCAAACGGCAACAGCGGACCGAACGGCTGGACAGTCGGATCGC 1000
BSNT_05825___ 1001 CGGGCACATCCAGAGAAGCGATTTCTGTCGGTGCGACTCAGCTGCCGCTC 1050
||||||||||.|||||||||||||||||||||||||||||||||||||||
BSU38090___vp 1001 CGGGCACATCAAGAGAAGCGATTTCTGTCGGTGCGACTCAGCTGCCGCTC 1050
BSNT_05825___ 1051 AATGAATACGCCGTCACTTTCGGCTCCTATTCTTCAGCAAAAGTGATGGG 1100
|||||||||||||||||||||||||||||.||||||||||||||||||||
BSU38090___vp 1051 AATGAATACGCCGTCACTTTCGGCTCCTACTCTTCAGCAAAAGTGATGGG 1100
BSNT_05825___ 1101 CTATAACAAAGAGGACGACGTCAAAGCGCTCAATAACAAAGAAGTTGAGC 1150
|||.||||||||||||||||||||||||||||||||||||||||||||||
BSU38090___vp 1101 CTACAACAAAGAGGACGACGTCAAAGCGCTCAATAACAAAGAAGTTGAGC 1150
BSNT_05825___ 1151 TTGTCGAAGCGGGAATCGGCGAAGCAAAGGATTTTGAAGGGAAAGACCTG 1200
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU38090___vp 1151 TTGTCGAAGCGGGAATCGGCGAAGCAAAGGATTTTGAAGGGAAAGACCTG 1200
BSNT_05825___ 1201 ACAGGCAAAGTCGCCGTTGTCAAACGAGGCAGCATTGCATTTGTGGATAA 1250
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU38090___vp 1201 ACAGGCAAAGTCGCCGTTGTCAAACGAGGCAGCATTGCATTTGTGGATAA 1250
BSNT_05825___ 1251 AGCGGATAACGCTAAAAAAGCCGGTGCCATCGGCATGGTTGTGTATAACA 1300
|||||||||||||||||||||||||||.||||||||||||||||||||||
BSU38090___vp 1251 AGCGGATAACGCTAAAAAAGCCGGTGCAATCGGCATGGTTGTGTATAACA 1300
BSNT_05825___ 1301 ATCTCTCTGGAGAAATTGAAGCCAATGTGCCAGGCATGTCTGTCCCAACG 1350
|.||||||||||||||||||||||||||||||||||||||||||||||||
BSU38090___vp 1301 ACCTCTCTGGAGAAATTGAAGCCAATGTGCCAGGCATGTCTGTCCCAACG 1350
BSNT_05825___ 1351 ATTAAGCTTTCATTAGAAGACGGCGAAAAACTCGTCAGCGCCCTGAAAGC 1400
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU38090___vp 1351 ATTAAGCTTTCATTAGAAGACGGCGAAAAACTCGTCAGCGCCCTGAAAGC 1400
BSNT_05825___ 1401 TGGTGAGACAAAAACAACATTCAAGTTGACGGTCTCAAAAGCGCTCGGTG 1450
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU38090___vp 1401 TGGTGAGACAAAAACAACATTCAAGTTGACGGTCTCAAAAGCGCTCGGTG 1450
BSNT_05825___ 1451 AACAAGTCGCTGATTTCTCATCACGCGGTCCTGTTATGGATACGTGGATG 1500
||||||||||||||||||||||||||||.|||||||||||||||||||||
BSU38090___vp 1451 AACAAGTCGCTGATTTCTCATCACGCGGCCCTGTTATGGATACGTGGATG 1500
BSNT_05825___ 1501 ATTAAGCCTGATATTTCCGCGCCAGGGGTCAATATCGTGAGCACGATCCC 1550
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU38090___vp 1501 ATTAAGCCTGATATTTCCGCGCCAGGGGTCAATATCGTGAGCACGATCCC 1550
BSNT_05825___ 1551 AACACACGATCCTGACCATCCATACGGCTACGGATCAAAACAAGGAACAA 1600
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU38090___vp 1551 AACACACGATCCTGACCATCCATACGGCTACGGATCAAAACAAGGAACAA 1600
BSNT_05825___ 1601 GCATGGCATCGCCTCATATTGCCGGAGCGGTTGCCGTTATTAAACAAGCC 1650
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU38090___vp 1601 GCATGGCATCGCCTCATATTGCCGGAGCGGTTGCCGTTATTAAACAAGCC 1650
BSNT_05825___ 1651 AAACCAAAGTGGAGCGTTGAACAGATTAAAACCGCCATCATGAATACCGC 1700
||||||||||||||||||||||||||||||.|||||||||||||||||||
BSU38090___vp 1651 AAACCAAAGTGGAGCGTTGAACAGATTAAAGCCGCCATCATGAATACCGC 1700
BSNT_05825___ 1701 TGTCACTTTAAAGGATAGCGATGGGGAAGTATATCCGCATAACGCTCAAG 1750
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU38090___vp 1701 TGTCACTTTAAAGGATAGCGATGGGGAAGTATATCCGCATAACGCTCAAG 1750
BSNT_05825___ 1751 GCGCAGGCAGCGCAAGAATCATGAACGCAATCAAAGCCGATTCGCTCGTC 1800
|||||||||||||||||||.||||||||||||||||||||||||||||||
BSU38090___vp 1751 GCGCAGGCAGCGCAAGAATTATGAACGCAATCAAAGCCGATTCGCTCGTC 1800
BSNT_05825___ 1801 TCACCTGGAAGCTATTCATACGGCACGTTCTTGAAGGAAAACGGAAACGA 1850
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU38090___vp 1801 TCACCTGGAAGCTATTCATACGGCACGTTCTTGAAGGAAAACGGAAACGA 1850
BSNT_05825___ 1851 AACAAAAAATGAAACGTTTACGATTGAAAATCAATCTTCCATTAGAAAGT 1900
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU38090___vp 1851 AACAAAAAATGAAACGTTTACGATTGAAAATCAATCTTCCATTAGAAAGT 1900
BSNT_05825___ 1901 CTTACACACTTGAATACTCATTTAATGGCAGCGGCATTTCCACATCCGGC 1950
|.||||||||||||||||||||||||||||||||||||||||||||||||
BSU38090___vp 1901 CATACACACTTGAATACTCATTTAATGGCAGCGGCATTTCCACATCCGGC 1950
BSNT_05825___ 1951 ACAAGCCGTGTTGTGATTCCGGCACATCAAACCGGGAAAGCCACTGCAAA 2000
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU38090___vp 1951 ACAAGCCGTGTTGTGATTCCGGCACATCAAACCGGGAAAGCCACTGCAAA 2000
BSNT_05825___ 2001 AGTAAAGGTCAATACGAAGAAAACAAAAGCTGGCACCTATGAAGGAACGG 2050
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU38090___vp 2001 AGTAAAGGTCAATACGAAGAAAACAAAAGCTGGCACCTATGAAGGAACGG 2050
BSNT_05825___ 2051 TTATCGTCAGAGAAGGCGGAAAAACGGTCGCTAAGGTACCTACATTGCTG 2100
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU38090___vp 2051 TTATCGTCAGAGAAGGCGGAAAAACGGTCGCTAAGGTACCTACATTGCTG 2100
BSNT_05825___ 2101 ATTGTGAAAGAGCCCGATTATCCGAGAGTCACATCTGTCTCTGTCAGCGA 2150
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU38090___vp 2101 ATTGTGAAAGAGCCCGATTATCCGAGAGTCACATCTGTCTCTGTCAGCGA 2150
BSNT_05825___ 2151 AGGGTCTGTACAAGGTACCTATCAAATTGAAACCTACCTTCCTGCGGGAG 2200
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU38090___vp 2151 AGGGTCTGTACAAGGTACCTATCAAATTGAAACCTACCTTCCTGCGGGAG 2200
BSNT_05825___ 2201 CGGAAGAGCTGGCGTTCCTCGTCTATGACAGCAACCTTGATTTCGCAGGC 2250
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU38090___vp 2201 CGGAAGAGCTGGCGTTCCTCGTCTATGACAGCAACCTTGATTTCGCAGGC 2250
BSNT_05825___ 2251 CAAGCCGGCATTTATAAAAACCAAGATAAAGGTTACCAGTACTTTGACTG 2300
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU38090___vp 2251 CAAGCCGGCATTTATAAAAACCAAGATAAAGGTTACCAGTACTTTGACTG 2300
BSNT_05825___ 2301 GGACGGCACGATTAATGGCGGAACCAAACTTCCGGCCGGAGAGTATTACT 2350
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU38090___vp 2301 GGACGGCACGATTAATGGCGGAACCAAACTTCCGGCCGGAGAGTATTACT 2350
BSNT_05825___ 2351 TGCTCGCATATGCCGCGAACAAAGGCAAGTCAAGCCAGGTTTTGACCGAA 2400
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU38090___vp 2351 TGCTCGCATATGCCGCGAACAAAGGCAAGTCAAGCCAGGTTTTGACCGAA 2400
BSNT_05825___ 2401 GAACCTTTCACTGTGGAATAA 2421
||||||||||||||.||||||
BSU38090___vp 2401 GAACCTTTCACTGTTGAATAA 2421
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