Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_05824 and BSU38080

See Amino acid alignment / Visit BSNT_05824 in genome browser / Return to Orthologue table
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# Program: needle
# Rundate: Mon  8 Mar 2010 06:27:03
# Commandline: needle
#    -asequence dna-align/BSNT_05824.1.22522.seq
#    -bsequence dna-align/BSU38080___ywcI.2.22522.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_05824-BSU38080___ywcI.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_05824-BSU38080___ywcI.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05824
# 2: BSU38080___ywcI
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 405
# Identity:     301/405 (74.3%)
# Similarity:   301/405 (74.3%)
# Gaps:         102/405 (25.2%)
# Score: 1497.0
# 
#
#=======================================

BSNT_05824         1 TTGCGAGAAAAGAAATCGGCCGTCTTTTCTTGCGGGCTGCGGCTGAGAAA     50
                                                                       
BSU38080___yw      0 --------------------------------------------------      0

BSNT_05824        51 ACGGGCTGCTAAAAAGGCTGCCTGCCAAAAAGAAGCGGAGGGATGTTTTT    100
                                                                       
BSU38080___yw      0 --------------------------------------------------      0

BSNT_05824       101 CTATGAAACGTTTGCTTGTATCTTTACGGGTGTGGATGGTCTTTTTGATG    150
                       ||||||||||||||||||||||||||||||||||||||||||||||||
BSU38080___yw      1 --ATGAAACGTTTGCTTGTATCTTTACGGGTGTGGATGGTCTTTTTGATG     48

BSNT_05824       151 AACTGGGTGACGCCGGACAGAAAAACTGCGGCTGCCGCGGTCTATTCGGC    200
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU38080___yw     49 AACTGGGTGACGCCGGACAGAAAAACTGCGGCTGCCGCGGTCTATTCGGC     98

BSNT_05824       201 TCAGCGTACATACCAAAGAAAGGCGGCTGTGCAGGCCGCAGGACTCGTTT    250
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU38080___yw     99 TCAGCGTACATACCAAAGAAAGGCGGCTGTGCAGGCCGCAGGACTCGTTT    148

BSNT_05824       251 CGTTTTATGAGTGGCGGATGGCTGTGAATGAGGAAGAAAAGCAGAAAGCG    300
                     ||||||||||.|||||||||||||||||||||||||||||||||||||||
BSU38080___yw    149 CGTTTTATGAATGGCGGATGGCTGTGAATGAGGAAGAAAAGCAGAAAGCG    198

BSNT_05824       301 AAAGCCGCCGCGCTTTATAAAAGAAGATGTTTGCAAGCCTTCAAGGAATC    350
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU38080___yw    199 AAAGCCGCCGCGCTTTATAAAAGAAGATGTTTGCAAGCCTTCAAGGAATC    248

BSNT_05824       351 GCCAAAGCAGGAGAGAGCGGGCCCGTATCTTTACATGGCGGTCAAAAGGA    400
                     |||||||||||||||||||||||||.||||||||||||||||||||||||
BSU38080___yw    249 GCCAAAGCAGGAGAGAGCGGGCCCGCATCTTTACATGGCGGTCAAAAGGA    298

BSNT_05824       401 GGTAA    405
                     |||||
BSU38080___yw    299 GGTAA    303


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