Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_05820 and BSU38060

See Amino acid alignment / Visit BSNT_05820 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:27:03
# Commandline: needle
#    -asequence dna-align/BSNT_05820___ywcJ.1.22522.seq
#    -bsequence dna-align/BSU38060___ywcJ.2.22522.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_05820___ywcJ-BSU38060___ywcJ.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_05820___ywcJ-BSU38060___ywcJ.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05820___ywcJ
# 2: BSU38060___ywcJ
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 771
# Identity:     763/771 (99.0%)
# Similarity:   763/771 (99.0%)
# Gaps:           0/771 ( 0.0%)
# Score: 3783.0
# 
#
#=======================================

BSNT_05820___      1 ATGGAAACTCAAGCATTGCAAAAGGTTGAACAGTATGCTTTGAAAAAACA     50
                     |||||||||||||||||.||||||||||||||||||||||||||||||||
BSU38060___yw      1 ATGGAAACTCAAGCATTACAAAAGGTTGAACAGTATGCTTTGAAAAAACA     50

BSNT_05820___     51 AAACATATTCGCTTCAAGCAAAATCCGTTATGTGCTTCGGTCCATTTTGG    100
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU38060___yw     51 AAACATATTCGCTTCAAGCAAAATCCGTTATGTGCTTCGGTCCATTTTGG    100

BSNT_05820___    101 CCAGTATGTTTATTGGTTTTGGCATTACAGCCGCAAGCAAAACAGGCAGC    150
                     |||||||.||||||||||||||||||||||||||||||||||||||||||
BSU38060___yw    101 CCAGTATATTTATTGGTTTTGGCATTACAGCCGCAAGCAAAACAGGCAGC    150

BSNT_05820___    151 TATTTCTTTATGGCTGATTCTCCGTTTGCCTTTCCGGCAGCCGCTGTCAC    200
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU38060___yw    151 TATTTCTTTATGGCTGATTCTCCGTTTGCCTTTCCGGCAGCCGCTGTCAC    200

BSNT_05820___    201 TTTCGGGGCCGCTATTCTGCTGATTGCTTACGGAGGCGGAGATTTATTTA    250
                     |||||||||||||||||||.||||||||||||||||||||||||||||||
BSU38060___yw    201 TTTCGGGGCCGCTATTCTGATGATTGCTTACGGAGGCGGAGATTTATTTA    250

BSNT_05820___    251 CCGGCAACACCTTTTATTTCACCTATACCGCGCTCCGGAAAAAACTCAGC    300
                     ||||||||||||||||||||||||||||||||||||||||||||.|||||
BSU38060___yw    251 CCGGCAACACCTTTTATTTCACCTATACCGCGCTCCGGAAAAAAATCAGC    300

BSNT_05820___    301 TGGCGCAACACCCTGTACTTGTGGATGTCAAGCTATGCCGGCAATTTAAT    350
                     ||||||.|||||||.|||||||||||||||||||||||||||||||||||
BSU38060___yw    301 TGGCGCGACACCCTATACTTGTGGATGTCAAGCTATGCCGGCAATTTAAT    350

BSNT_05820___    351 CGGCGCCATTCTGTTTGCCATCCTGATCAGCGCGACGGGACTTTTTGAGG    400
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU38060___yw    351 CGGCGCCATTCTGTTTGCCATCCTGATCAGCGCGACGGGACTTTTTGAGG    400

BSNT_05820___    401 AGCCTTCTGTTCATTCCTTTTTGATTCATTTGGCAGAGCACAAAATGGAA    450
                     |||||||||||||||||||||||||||||||||||||||||||||||||.
BSU38060___yw    401 AGCCTTCTGTTCATTCCTTTTTGATTCATTTGGCAGAGCACAAAATGGAG    450

BSNT_05820___    451 CCGCCGGCTTCCGAATTGTTTTTCAGAGGAATGCTGTGCAATTGGCTTGT    500
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU38060___yw    451 CCGCCGGCTTCCGAATTGTTTTTCAGAGGAATGCTGTGCAATTGGCTTGT    500

BSNT_05820___    501 GTGCCTCGCCTTTTTCATTCCAATGTCTCTCAAAGGGGAAGGAGCAAAGC    550
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU38060___yw    501 GTGCCTCGCCTTTTTCATTCCAATGTCTCTCAAAGGGGAAGGAGCAAAGC    550

BSNT_05820___    551 TTTTTACCATGATGCTATTCGTTTTCTGCTTCTTTATTTCCGGCTTTGAA    600
                     ||||||||||||||||.|||||||||||||||||||||||||||||||||
BSU38060___yw    551 TTTTTACCATGATGCTTTTCGTTTTCTGCTTCTTTATTTCCGGCTTTGAA    600

BSNT_05820___    601 CACAGCATTGCCAATATGTGCACATTCGCCATCTCGCTTTTGATCGAGCA    650
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU38060___yw    601 CACAGCATTGCCAATATGTGCACATTCGCCATCTCGCTTTTGATCGAGCA    650

BSNT_05820___    651 CCCTGATACAGTGACACTGATGGGAGCAGTCAGAAACTTAATCCCCGTTA    700
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU38060___yw    651 CCCTGATACAGTGACACTGATGGGAGCAGTCAGAAACTTAATCCCCGTTA    700

BSNT_05820___    701 CGCTCGGCAATCTGACCGCGGGAATAGTTATGATGGGCTGGATGTACTAC    750
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU38060___yw    701 CGCTCGGCAATCTGACCGCGGGAATAGTTATGATGGGCTGGATGTACTAC    750

BSNT_05820___    751 ACACTGAATCCTGATCAATAA    771
                     |||||||||||||||||||||
BSU38060___yw    751 ACACTGAATCCTGATCAATAA    771


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