Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_05815 and BSU38020

See Amino acid alignment / Visit BSNT_05815 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:27:02
# Commandline: needle
#    -asequence dna-align/BSNT_05815___thiD.1.22522.seq
#    -bsequence dna-align/BSU38020___thiD.2.22522.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_05815___thiD-BSU38020___thiD.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_05815___thiD-BSU38020___thiD.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05815___thiD
# 2: BSU38020___thiD
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 816
# Identity:     811/816 (99.4%)
# Similarity:   811/816 (99.4%)
# Gaps:           0/816 ( 0.0%)
# Score: 4035.0
# 
#
#=======================================

BSNT_05815___      1 ATGTCTATGAATAAAGCACTCACCATTGCCGGCTCAGATTCCAGCGGCGG     50
                     |||||||||.||||||||||||||||||||||||||||||||||||||||
BSU38020___th      1 ATGTCTATGCATAAAGCACTCACCATTGCCGGCTCAGATTCCAGCGGCGG     50

BSNT_05815___     51 TGCTGGGATTCAAGCTGATTTAAAAACATTTCAAGAAAAAAACGTATACG    100
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU38020___th     51 TGCTGGGATTCAAGCTGATTTAAAAACATTTCAAGAAAAAAACGTATACG    100

BSNT_05815___    101 GGATGACCGCCTTAACGGTGATCGTTGCGATGGACCCAAACAACAGCTGG    150
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU38020___th    101 GGATGACCGCCTTAACGGTGATCGTTGCGATGGACCCAAACAACAGCTGG    150

BSNT_05815___    151 GACCATCAGGTATTCCCGATCGATACTGATACAATCCGCGCCCAGCTTGC    200
                     .|||||||||||||||||||||||||||||||||||||||||||||||||
BSU38020___th    151 AACCATCAGGTATTCCCGATCGATACTGATACAATCCGCGCCCAGCTTGC    200

BSNT_05815___    201 AACAATTACGGACGGCATCGGCGTGGACGCCATGAAAACAGGAATGCTGC    250
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU38020___th    201 AACAATTACGGACGGCATCGGCGTGGACGCCATGAAAACAGGAATGCTGC    250

BSNT_05815___    251 CAACCGTTGACATTATCGAGCTTGCGGCAAAAACGATCAAAGAAAAACAA    300
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU38020___th    251 CAACCGTTGACATTATCGAGCTTGCGGCAAAAACGATCAAAGAAAAACAA    300

BSNT_05815___    301 TTAAAAAATGTGGTAATTGACCCTGTTATGGTTTGCAAAGGTGCTAATGA    350
                     |||||||||||||||||||||||.||||||||||||||||||||||||||
BSU38020___th    301 TTAAAAAATGTGGTAATTGACCCGGTTATGGTTTGCAAAGGTGCTAATGA    350

BSNT_05815___    351 AGTCCTTTATCCGGAGCACGCCCAAGCCCTGCGTGAGCAATTGGCTCCGC    400
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU38020___th    351 AGTCCTTTATCCGGAGCACGCCCAAGCCCTGCGTGAGCAATTGGCTCCGC    400

BSNT_05815___    401 TAGCCACTGTCATTACGCCAAACTTGTTTGAAGCCAGCCAGCTCAGCGGC    450
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU38020___th    401 TAGCCACTGTCATTACGCCAAACTTGTTTGAAGCCAGCCAGCTCAGCGGC    450

BSNT_05815___    451 ATGGATGAACTAAAAACAGTTGACGATATGATCGAAGCCGCGAAAAAAAT    500
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU38020___th    451 ATGGATGAACTAAAAACAGTTGACGATATGATCGAAGCCGCGAAAAAAAT    500

BSNT_05815___    501 TCACGCACTCGGCGCTCAATATGTCGTCATTACAGGCGGAGGCAAACTCA    550
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU38020___th    501 TCACGCACTCGGCGCTCAATATGTCGTCATTACAGGCGGAGGCAAACTCA    550

BSNT_05815___    551 AACATGAGAAAGCCGTTGATGTTCTCTATGACGGAGAAACAGCGGAAGTC    600
                     ||||.|||||||||||||||||||||||||||||||||||||||||||||
BSU38020___th    551 AACACGAGAAAGCCGTTGATGTTCTCTATGACGGAGAAACAGCGGAAGTC    600

BSNT_05815___    601 CTTGAAAGCGAAATGATCGATACGCCTTATACACATGGCGCAGGCTGTAC    650
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU38020___th    601 CTTGAAAGCGAAATGATCGATACGCCTTATACACATGGCGCAGGCTGTAC    650

BSNT_05815___    651 GTTCTCAGCAGCCGTGACAGCGGAGCTTGCCAAAGGTGCGGAAGTCAAAG    700
                     .|||||||||||||||||||||||||||||||||||||||||||||||||
BSU38020___th    651 ATTCTCAGCAGCCGTGACAGCGGAGCTTGCCAAAGGTGCGGAAGTCAAAG    700

BSNT_05815___    701 AAGCCATTTACGCAGCGAAAGAATTCATCACAGCGGCCATTAAAGAATCC    750
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU38020___th    701 AAGCCATTTACGCAGCGAAAGAATTCATCACAGCGGCCATTAAAGAATCC    750

BSNT_05815___    751 TTCCCGCTAAACCAGTATGTTGGTCCTACGAAGCATTCTGCACTGCGCCT    800
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU38020___th    751 TTCCCGCTAAACCAGTATGTTGGTCCTACGAAGCATTCTGCACTGCGCCT    800

BSNT_05815___    801 GAATCAACAATCATAA    816
                     ||||||||||||||||
BSU38020___th    801 GAATCAACAATCATAA    816


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