Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_05812 and BSU37960
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:27:02
# Commandline: needle
# -asequence dna-align/BSNT_05812___ywdH.1.22522.seq
# -bsequence dna-align/BSU37960___ywdH.2.22522.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_05812___ywdH-BSU37960___ywdH.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_05812___ywdH-BSU37960___ywdH.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05812___ywdH
# 2: BSU37960___ywdH
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1371
# Identity: 1354/1371 (98.8%)
# Similarity: 1354/1371 (98.8%)
# Gaps: 0/1371 ( 0.0%)
# Score: 6702.0
#
#
#=======================================
BSNT_05812___ 1 ATGAACAGCATCCCCTCTATCATCAGCAAGCATAAAGCCTATTTTGCGGC 50
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU37960___yw 1 ATGAACAGCATCCCCTCTATCATCAGCAAGCATAAAGCCTATTTTGCGGC 50
BSNT_05812___ 51 GGGACATACGAGACCGCTTGAATCGAGACTGAACATTTTGCGAAAGCTGA 100
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU37960___yw 51 GGGACATACGAGACCGCTTGAATCGAGACTGAACATTTTGCGAAAGCTGA 100
BSNT_05812___ 101 AACAAGCCGTCAGAACTCATGAAGCCGATCTCATAGCCGCTCTCTACCAG 150
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU37960___yw 101 AACAAGCCGTCAGAACTCATGAAGCCGATCTCATAGCCGCTCTCTACCAG 150
BSNT_05812___ 151 GATCTCCACAAATCCGAGCAAGAAGCATACTCAACAGAAATCGGAATCGT 200
||||||||.|||||||||||||||||||||||||||||||||||||||||
BSU37960___yw 151 GATCTCCATAAATCCGAGCAAGAAGCATACTCAACAGAAATCGGAATCGT 200
BSNT_05812___ 201 CTTGGAGGAAATCAGCTTTGTCATGAAACGGCTGAGAAAATGGTCCAAGC 250
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU37960___yw 201 CTTGGAGGAAATCAGCTTTGTCATGAAACGGCTGAGAAAATGGTCCAAGC 250
BSNT_05812___ 251 CGAAACGAGTCAAAACGCCGCTGACTCATCTAGGCTCCAAAAGCATCATC 300
||||||||||||||||||||.|||||||||||||||||||||||||||||
BSU37960___yw 251 CGAAACGAGTCAAAACGCCGTTGACTCATCTAGGCTCCAAAAGCATCATC 300
BSNT_05812___ 301 ATTCCTGAGCCGTATGGAACCGTTTTGGTGATTGCACCTTGGAACTATCC 350
||.||||||||||||||||||||||||||||||||.||||||||||||||
BSU37960___yw 301 ATCCCTGAGCCGTATGGAACCGTTTTGGTGATTGCGCCTTGGAACTATCC 350
BSNT_05812___ 351 CTTGCAGCTGGCGCTTTCTCCGTTGATTGGAGCCATTGCGGCGGGGAACA 400
||||||||||||||||||||||||||||||.|||||||||||||||||||
BSU37960___yw 351 CTTGCAGCTGGCGCTTTCTCCGTTGATTGGCGCCATTGCGGCGGGGAACA 400
BSNT_05812___ 401 CGGTCGTTCTCAAGCCATCAGAATATACGCCGGCTGTTTCTGCTATTCTT 450
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU37960___yw 401 CGGTCGTTCTCAAGCCATCAGAATATACGCCGGCTGTTTCTGCTATTCTT 450
BSNT_05812___ 451 TCCAAACTCATCAGCAGCGTTTTTCCTACTGATTATGTCGCTATGGCAGA 500
||||||||||||||||||||||||||.|||||||||||||||||||||||
BSU37960___yw 451 TCCAAACTCATCAGCAGCGTTTTTCCAACTGATTATGTCGCTATGGCAGA 500
BSNT_05812___ 501 AGGCGGGCCCGATGTCAGCACAGCATTATTACAGCAGCCCTTTGACTACA 550
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU37960___yw 501 AGGCGGGCCCGATGTCAGCACAGCATTATTACAGCAGCCCTTTGACTACA 550
BSNT_05812___ 551 TTTTCTTTACAGGCAGTGTAGCTGTAGGAAAAATCGTCATGGAGGCCGCC 600
||||||||||.|||||||||||||||||||||||||||||||||||||||
BSU37960___yw 551 TTTTCTTTACCGGCAGTGTAGCTGTAGGAAAAATCGTCATGGAGGCCGCC 600
BSNT_05812___ 601 GCCAAACAATTAATTCCCGTAACCTTGGAGCTCGGCGGCAAAAGCCCCTG 650
||||||||||||||||||||||||||||||||||||||||||||.|||||
BSU37960___yw 601 GCCAAACAATTAATTCCCGTAACCTTGGAGCTCGGCGGCAAAAGTCCCTG 650
BSNT_05812___ 651 CATCGTCCATAAAGATGCTGACATTCAGCTTGCCGCCAAACGCATCGTCT 700
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU37960___yw 651 CATCGTCCATAAAGATGCTGACATTCAGCTTGCCGCCAAACGCATCGTCT 700
BSNT_05812___ 701 TCGGGAAATTTACAAATGCGGGACAAACCTGCATCGCACCGGATTATTTA 750
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU37960___yw 701 TCGGGAAATTTACAAATGCGGGACAAACCTGCATCGCACCGGATTATTTA 750
BSNT_05812___ 751 TTTGTCCACGAGGACATCAAAACGAAGCTGGCAGAAGAAATGAAGCGTGC 800
|||||||||||||||||||||||||||||..|||||||||||||||||||
BSU37960___yw 751 TTTGTCCACGAGGACATCAAAACGAAGCTCACAGAAGAAATGAAGCGTGC 800
BSNT_05812___ 801 GATCAGAGAATTTTACGGCCCTCAGCCGGAACGGAATCCACAGTACGGCA 850
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU37960___yw 801 GATCAGAGAATTTTACGGCCCTCAGCCGGAACGGAATCCACAGTACGGCA 850
BSNT_05812___ 851 AAATCGTCAGTGAGCGCCACTATCAGCGGCTGCTCAGCTTTCTGAATGAT 900
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU37960___yw 851 AAATCGTCAGTGAGCGCCACTATCAGCGGCTGCTCAGCTTTCTGAATGAT 900
BSNT_05812___ 901 GGCATCCCGCTCACAGGCGGACAATCTGATCCTGATCACCACAAAATTGC 950
||||||||||||||||||||||||||||||||..||||.|||||||||||
BSU37960___yw 901 GGCATCCCGCTCACAGGCGGACAATCTGATCCCAATCATCACAAAATTGC 950
BSNT_05812___ 951 GCCGACCATTCTCGAACAAGTGAGAGATGACTCTCCAGTGATGCAGGAGG 1000
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU37960___yw 951 GCCGACCATTCTCGAACAAGTGAGAGATGACTCTCCAGTGATGCAGGAGG 1000
BSNT_05812___ 1001 AAATTTTCGGGCCGATTCTTCCGCTCTTTACATACCGCGATATCGGGGAA 1050
|.||||||||||||||||||||||||||||||||||||.|||||||||||
BSU37960___yw 1001 AGATTTTCGGGCCGATTCTTCCGCTCTTTACATACCGCAATATCGGGGAA 1050
BSNT_05812___ 1051 GTCATTGAAAAAGTCCAATCGCGCCCTAAGCCGCTCGCCCTGTATCTCTT 1100
||||||||.|||||||||||||||||||||||||||||||||||||||||
BSU37960___yw 1051 GTCATTGAGAAAGTCCAATCGCGCCCTAAGCCGCTCGCCCTGTATCTCTT 1100
BSNT_05812___ 1101 CACCACAAACAAAGAAACTGAGCGCGCTGTTTTAGGAAATCTGTCGTTTG 1150
|||||||||||||||||.||||||||||||||||||||||||||||||||
BSU37960___yw 1101 CACCACAAACAAAGAAATTGAGCGCGCTGTTTTAGGAAATCTGTCGTTTG 1150
BSNT_05812___ 1151 GCGGGGGCTGTGTCAATGATACGTTAATGCATGTTGCGACGCCGTATTTG 1200
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU37960___yw 1151 GCGGGGGCTGTGTCAATGATACGTTAATGCATGTTGCGACGCCGTATTTG 1200
BSNT_05812___ 1201 CCATTCGGCGGCGTCGGGGAAAGCGGCATCGGCAGCTATCACGGGTTTGA 1250
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU37960___yw 1201 CCATTCGGCGGCGTCGGGGAAAGCGGCATCGGCAGCTATCACGGGTTTGA 1250
BSNT_05812___ 1251 CAGTTTTAACACATTCACGCACAAAAAAAGCGTCGTCAAACAAACGAACC 1300
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU37960___yw 1251 CAGTTTTAACACATTCACGCACAAAAAAAGCGTCGTCAAACAAACGAACC 1300
BSNT_05812___ 1301 GTTTCGACTTCGCATTTCGTTATCCTTCCTCCAAAAACGGGCTGCGAATG 1350
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU37960___yw 1301 GTTTCGACTTCGCATTTCGTTATCCTTCCTCCAAAAACGGGCTGCGAATG 1350
BSNT_05812___ 1351 ATTCGAAAAATACTCAAATAA 1371
|||||||||||||||||||||
BSU37960___yw 1351 ATTCGAAAAATACTCAAATAA 1371
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