Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_05796 and BSU37880

See Amino acid alignment / Visit BSNT_05796 in genome browser / Return to Orthologue table
########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:27:00
# Commandline: needle
#    -asequence dna-align/BSNT_05796___spsD.1.22522.seq
#    -bsequence dna-align/BSU37880___spsD.2.22522.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_05796___spsD-BSU37880___spsD.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_05796___spsD-BSU37880___spsD.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05796___spsD
# 2: BSU37880___spsD
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 870
# Identity:     858/870 (98.6%)
# Similarity:   858/870 (98.6%)
# Gaps:           0/870 ( 0.0%)
# Score: 4242.0
# 
#
#=======================================

BSNT_05796___      1 GTGTATACGGTAAAAGAAAATGTCTCCAAAGAGTTGATTGAGGAATTTCT     50
                     |||||||||||||||||||||||||||||||||...||||||||||||||
BSU37880___sp      1 GTGTATACGGTAAAAGAAAATGTCTCCAAAGAGGCAATTGAGGAATTTCT     50

BSNT_05796___     51 CCAAAGCCGACAGCTTACACTGGATGTTCCGTATCAATTTTCCCTCGGCC    100
                     |||||||.||.||||||||.||||||||||||||||||||||||||||||
BSU37880___sp     51 CCAAAGCAGAAAGCTTACATTGGATGTTCCGTATCAATTTTCCCTCGGCC    100

BSNT_05796___    101 TTTTTGAAAACAGCAGGCTCCAAGGCGTATTGCTTTACGAAGATTCTTTG    150
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU37880___sp    101 TTTTTGAAAACAGCAGGCTCCAAGGCGTATTGCTTTACGAAGATTCTTTG    150

BSNT_05796___    151 TGGGAAAGCAAGGTGCTTCAGAAGAAAGTCATGAACGTCAAACTTCTTGC    200
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU37880___sp    151 TGGGAAAGCAAGGTGCTTCAGAAGAAAGTCATGAACGTCAAACTTCTTGC    200

BSNT_05796___    201 GGCAAATAGTACCGGGCAGCTAAAGAGGCTGTTTGAAGCTTTTTATACTG    250
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU37880___sp    201 GGCAAATAGTACCGGGCAGCTAAAGAGGCTGTTTGAAGCTTTTTATACTG    250

BSNT_05796___    251 TACGCCAAATGGATGAAACGGATTTTATCTTTGTCCGTGTTCCCGCTGAA    300
                     |||||||||||||||||||||||||||||||||||||||||||.||||||
BSU37880___sp    251 TACGCCAAATGGATGAAACGGATTTTATCTTTGTCCGTGTTCCGGCTGAA    300

BSNT_05796___    301 GATATCGGAGCCGCGCATGTGATACAGCAGCAGCCATCCTCTTACTTTGT    350
                     ||||||||||||||||||||||||||.|||||||||||||||||||||||
BSU37880___sp    301 GATATCGGAGCCGCGCATGTGATACAACAGCAGCCATCCTCTTACTTTGT    350

BSNT_05796___    351 CGGGAGTTTGCTGAAGCTGGCGATGCCTCCGTCTTTTTATGACAAAACAC    400
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU37880___sp    351 CGGGAGTTTGCTGAAGCTGGCGATGCCTCCGTCTTTTTATGACAAAACAC    400

BSNT_05796___    401 CGCCATTTTTTGAACTGGGCCCGCCTGAGCCCGGAGACACAGAAGCGATA    450
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU37880___sp    401 CGCCATTTTTTGAACTGGGCCCGCCTGAGCCCGGAGACACAGAAGCGATA    450

BSNT_05796___    451 TGTGAGCTGGCCCGAGACTCGTTTACAAAAAGCAGATATTTTCAGGATCC    500
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU37880___sp    451 TGTGAGCTGGCCCGAGACTCGTTTACAAAAAGCAGATATTTTCAGGATCC    500

BSNT_05796___    501 TCATCTCAGCCGCGATGCAGCAAACAAAATATTTCAGGAGTGGACACGAA    550
                     |||||||||||||||||||||||||.||||||||||||||||||||||||
BSU37880___sp    501 TCATCTCAGCCGCGATGCAGCAAACGAAATATTTCAGGAGTGGACACGAA    550

BSNT_05796___    551 ACAATCTGAATGGAAGGGCGGCGGTCAATATTGTCGCTAAACACAATGGC    600
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU37880___sp    551 ACAATCTGAATGGAAGGGCGGCGGTCAATATTGTCGCTAAACACAATGGC    600

BSNT_05796___    601 GAGGTCATCGGCTATCTTCAGGGCTTATCAAGAGATGATGAATGCATTCT    650
                     |||||||||||||||||||||||||||||||||||||||||.||||||||
BSU37880___sp    601 GAGGTCATCGGCTATCTTCAGGGCTTATCAAGAGATGATGAGTGCATTCT    650

BSNT_05796___    651 CGATTTGATGGCTGTAAAGCCGGGATTTGAAGGAAAACGTATTGCGTTTC    700
                     |||||||||||||||||||||||||||||||||.||||||||||||||||
BSU37880___sp    651 CGATTTGATGGCTGTAAAGCCGGGATTTGAAGGGAAACGTATTGCGTTTC    700

BSNT_05796___    701 ATTTATTGGCGAATCTCATAGAACAACCGGAGACCCAGAAGCATAGAACG    750
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU37880___sp    701 ATTTATTGGCGAATCTCATAGAACAACCGGAGACCCAGAAGCATAGAACG    750

BSNT_05796___    751 GTAACAGCGGGGACGCAGCTCCACAATGTAAGGGCGATCCGCCTTTATGA    800
                     ||||||||||||||||||||.|||||||||||||||||||||||||||||
BSU37880___sp    751 GTAACAGCGGGGACGCAGCTTCACAATGTAAGGGCGATCCGCCTTTATGA    800

BSNT_05796___    801 ACGAATGGGCTTCACCGCTGAACAATCGTATTACTATTATCATATTTGGC    850
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU37880___sp    801 ACGAATGGGCTTCACCGCTGAACAATCGTATTACTATTATCATATTTGGC    850

BSNT_05796___    851 CGGGCAAGGAGGCGAAATAA    870
                     ||||||||||||||||||||
BSU37880___sp    851 CGGGCAAGGAGGCGAAATAA    870


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Natto Genome Project Bacillus subtilis subsp. natto str. BEST195

DNA alignment: BSNT_05796 and BSU37880

Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
