Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

Home

About

Browser

Genes

Download

Publications

DNA alignment: BSNT_05789 and BSU37820

See Amino acid alignment / Visit BSNT_05789 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:26:59
# Commandline: needle
#    -asequence dna-align/BSNT_05789___spsK.1.22522.seq
#    -bsequence dna-align/BSU37820___spsK.2.22522.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_05789___spsK-BSU37820___spsK.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_05789___spsK-BSU37820___spsK.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05789___spsK
# 2: BSU37820___spsK
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 852
# Identity:     841/852 (98.7%)
# Similarity:   841/852 (98.7%)
# Gaps:           0/852 ( 0.0%)
# Score: 4161.0
# 
#
#=======================================

BSNT_05789___      1 TTGACAAAGGTATTGGTGACTGGGGCGGGAGGACAGCTTGGCTTGGAACT     50
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU37820___sp      1 TTGACAAAGGTATTGGTGACTGGGGCGGGAGGACAGCTTGGCTTGGAACT     50

BSNT_05789___     51 ATGCCGCCAGCTGAAGCAAGCCGGATATGAGGTCATTGCGTTAACAAAGA    100
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU37820___sp     51 ATGCCGCCAGCTGAAGCAAGCCGGATATGAGGTCATTGCGTTAACAAAGA    100

BSNT_05789___    101 AGATGATGAACATTGCTGACCAGCGCTCAGTACGGCATTCGTTTGGCCAT    150
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU37820___sp    101 AGATGATGAACATTGCTGACCAGCGCTCAGTACGGCATTCGTTTGGCCAT    150

BSNT_05789___    151 TATCAGCCGGATATCGTGGTCAATAGCGCCGCGTTTACGTCGGTTGATCA    200
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU37820___sp    151 TATCAGCCGGATATCGTGGTCAATAGCGCCGCGTTTACGTCGGTTGATCA    200

BSNT_05789___    201 ATGCGAGAAAGAGCTTGATAAAGCGTACTTGGTTAACGGAATCGGCGCTT    250
                     |||||||||||||||||||||||||||||||.||||||||||||||||||
BSU37820___sp    201 ATGCGAGAAAGAGCTTGATAAAGCGTACTTGATTAACGGAATCGGCGCTT    250

BSNT_05789___    251 ATTATACAGCGCTTGAGTCAACCCGCATCGGTGCTCAATATGTTCATATC    300
                     |||||||||||||||||||||||||||||||.||||||||||||||||||
BSU37820___sp    251 ATTATACAGCGCTTGAGTCAACCCGCATCGGAGCTCAATATGTTCATATC    300

BSNT_05789___    301 AGCACGGACTATGTATTCAATGGGAAAGGAACCCAGCCATATAGGGAAGA    350
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU37820___sp    301 AGCACGGACTATGTATTCAATGGGAAAGGAACCCAGCCATATAGGGAAGA    350

BSNT_05789___    351 CGATCCCCTCGATCCGAAAACCATTTATGGCAAAAGCAAAAGGCTTGGAG    400
                     |||||||||||||||||||||||||||||||||||||||||||||.||||
BSU37820___sp    351 CGATCCCCTCGATCCGAAAACCATTTATGGCAAAAGCAAAAGGCTCGGAG    400

BSNT_05789___    401 AAGAACTGATAAGATTAACGACAAAAGACAGCACGATCATCAGAACATCG    450
                     |||||||||||.|||||||||||||||||||||||||||||||.||||||
BSU37820___sp    401 AAGAACTGATACGATTAACGACAAAAGACAGCACGATCATCAGGACATCG    450

BSNT_05789___    451 TGGGTGTACGGACATGGCGGCAGTAATTTCGTTGAAACCATGCTGAAGTT    500
                     |||||||||||||||||||||||||||||||||||||||||||||||..|
BSU37820___sp    451 TGGGTGTACGGACATGGCGGCAGTAATTTCGTTGAAACCATGCTGAAACT    500

BSNT_05789___    501 TGCTGAAACGAAACAAGAGCTTCGGGTTGTCAGCGATCAAATTGGTTCGC    550
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU37820___sp    501 TGCTGAAACGAAACAAGAGCTTCGGGTTGTCAGCGATCAAATTGGTTCGC    550

BSNT_05789___    551 CGACTTATACGAAGGATTTAGCAGAAGCGGTCATCAAGCTGTTCAGCCAT    600
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU37820___sp    551 CGACTTATACGAAGGATTTAGCAGAAGCGGTCATCAAGCTGTTCAGCCAT    600

BSNT_05789___    601 CCGCCGGGCATCTATCATGTCAGCAATTCAGGCATATGCAGCTGGTATGA    650
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU37820___sp    601 CCGCCGGGCATCTATCATGTCAGCAATTCAGGCATATGCAGCTGGTATGA    650

BSNT_05789___    651 GTTTGCGATGGCAATTATGGAAGAAAGCGGGCTGGAAACAGCCATTTTGC    700
                     ||||||||.||||||||||||||||||||||||||||||||||||||||.
BSU37820___sp    651 GTTTGCGACGGCAATTATGGAAGAAAGCGGGCTGGAAACAGCCATTTTGT    700

BSNT_05789___    701 CTGTAACGACAGAGGAATACGGGAACAAAACGCCCCGTCCGGCATACTCT    750
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU37820___sp    701 CTGTAACGACAGAGGAATACGGGAACAAAACGCCCCGTCCGGCATACTCT    750

BSNT_05789___    751 GTGCTGAGCCATCGGGCCATTGAAGAAGCCGGCATCCGCCCCCGCCACTG    800
                     |||||||||||||||||.||||||||||||||||||||||||||||||||
BSU37820___sp    751 GTGCTGAGCCATCGGGCTATTGAAGAAGCCGGCATCCGCCCCCGCCACTG    800

BSNT_05789___    801 GCGGGAAGCGTTACGAGAGTATTTGCAGGAAAGGAGCAGTACGTGTGATT    850
                     ||||||||||||||||||||||||||||||||||||||||.|||||||||
BSU37820___sp    801 GCGGGAAGCGTTACGAGAGTATTTGCAGGAAAGGAGCAGTGCGTGTGATT    850

BSNT_05789___    851 GA    852
                     ||
BSU37820___sp    851 GA    852


#---------------------------------------
#---------------------------------------

Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.