Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_05779 and BSU37770

See Amino acid alignment / Visit BSNT_05779 in genome browser / Return to Orthologue table
########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:26:58
# Commandline: needle
#    -asequence dna-align/BSNT_05779___rocB.1.22522.seq
#    -bsequence dna-align/BSU37770___rocB.2.22522.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_05779___rocB-BSU37770___rocB.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_05779___rocB-BSU37770___rocB.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05779___rocB
# 2: BSU37770___rocB
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1701
# Identity:    1678/1701 (98.6%)
# Similarity:  1678/1701 (98.6%)
# Gaps:           0/1701 ( 0.0%)
# Score: 8298.0
# 
#
#=======================================

BSNT_05779___      1 ATGCAGTATACAAAAATCAGTCACATGAATCCGGCTGAAAGAGTGGAGGC     50
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU37770___ro      1 ATGCAGTATACAAAAATCAGTCACATGAATCCGGCTGAAAGAGTGGAGGC     50

BSNT_05779___     51 GCTGACAGCATCTCTGGTCAGCCTCAGCAGCGTGAACGGCACCGTTGGAG    100
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU37770___ro     51 GCTGACAGCATCTCTGGTCAGCCTCAGCAGCGTGAACGGCACCGTTGGAG    100

BSNT_05779___    101 AAGGGACAAAAGCAGATTTCATCAAAGAAGTGATCACGAGCTATCCTTAT    150
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU37770___ro    101 AAGGGACAAAAGCAGATTTCATCAAAGAAGTGATCACGAGCTATCCTTAT    150

BSNT_05779___    151 TTTCAGGAAAACCCCAGTCATGTGTGGGAACAGGCCATTCCCAATGACCC    200
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU37770___ro    151 TTTCAGGAAAACCCCAGTCATGTGTGGGAACAGGCCATTCCCAATGACCC    200

BSNT_05779___    201 ATACAATCGCAAAAATATTTTTGCGTTTATTAAAGGACATGGAGAAAGCC    250
                     ||||||.|||||||||||||||||||||||||||||||||||||||||||
BSU37770___ro    201 ATACAAACGCAAAAATATTTTTGCGTTTATTAAAGGACATGGAGAAAGCC    250

BSNT_05779___    251 GTAATACAGTCATTTACCATGCCCATCTGGATACAGTTGGAATCGAAGAT    300
                     |.|||||||||||||||||||||||||||||||||||||||||.||||||
BSU37770___ro    251 GAAATACAGTCATTTACCATGCCCATCTGGATACAGTTGGAATTGAAGAT    300

BSNT_05779___    301 TTCGGCCCTTTAAAGGATATCGCTTTTGATTGTGAGAAATTGGCCGAGTA    350
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU37770___ro    301 TTCGGCCCTTTAAAGGATATCGCTTTTGATTGTGAGAAATTGGCCGAGTA    350

BSNT_05779___    351 TTTCAGCCGCTATGAGTTCGATCAGGATGTTCAGCGGGATGCCAAATCAG    400
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU37770___ro    351 TTTCAGCCGCTATGAGTTCGATCAGGATGTTCAGCGGGATGCCAAATCAG    400

BSNT_05779___    401 GCGATTGGATGTTCGGAAGAGGATCTGTTGATATGCAAAGCGGCATCGCC    450
                     ||||.|||||||||||||||||||||||.|||||||||||||||||||||
BSU37770___ro    401 GCGAGTGGATGTTCGGAAGAGGATCTGTCGATATGCAAAGCGGCATCGCC    450

BSNT_05779___    451 GTGCATTTAGCCAATCTCCTGCATTTTTCGGAGAACCTTGAGACGTTGCC    500
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU37770___ro    451 GTGCATTTAGCCAATCTCCTGCATTTTTCGGAGAACCTTGAGACGTTGCC    500

BSNT_05779___    501 GGGAAATGTATTGTTTATGGCCAATCCCGATGAGGAGAGCCAGCATTCGG    550
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU37770___ro    501 GGGAAATGTATTGTTTATGGCCAATCCCGATGAGGAGAGCCAGCATTCGG    550

BSNT_05779___    551 GCATTCTCGCCAGCATTTCAGAGCTGAACCGGTTAAAAAAAGAAAAACAG    600
                     ||||||||||||||||||||||||||||||||.|||||||||||||||||
BSU37770___ro    551 GCATTCTCGCCAGCATTTCAGAGCTGAACCGGCTAAAAAAAGAAAAACAG    600

BSNT_05779___    601 CTTCACTATTTGGCTGCTATTAATACAGATTTTATTACCCCGCTTTACGA    650
                     ||||||||||||||||||||||||||.|||||||||||||||||||||||
BSU37770___ro    601 CTTCACTATTTGGCTGCTATTAATACGGATTTTATTACCCCGCTTTACGA    650

BSNT_05779___    651 TGGTGATCAGACAAGATATATCTATACCGGAGCCGCGGGAAAACTGCTGC    700
                     ||||||||||||||||||||||||||||||||||||||||||||||.|||
BSU37770___ro    651 TGGTGATCAGACAAGATATATCTATACCGGAGCCGCGGGAAAACTGTTGC    700

BSNT_05779___    701 CATGCTTTTACATTTACGGGCGTGAAGTCCATGTTGGCGATACACTGGCA    750
                     |.||||||||||||||||||||||||||||||||||||||||||||||||
BSU37770___ro    701 CTTGCTTTTACATTTACGGGCGTGAAGTCCATGTTGGCGATACACTGGCA    750

BSNT_05779___    751 GGGATTGACCCAAATTTCATTTCATCTGAAATCACAAGCCGTCTCCACAA    800
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU37770___ro    751 GGGATTGACCCAAATTTCATTTCATCTGAAATCACAAGCCGTCTCCACAA    800

BSNT_05779___    801 TAACATCCATCTGGCAGAAAAGGTTGAAGGGGAGTTGGTTCTGCCACCAT    850
                     |||||||||||||||||||||||||||||||||||||||||||||.||||
BSU37770___ro    801 TAACATCCATCTGGCAGAAAAGGTTGAAGGGGAGTTGGTTCTGCCCCCAT    850

BSNT_05779___    851 CCTGTTTGTATCAGCGTGATAACAAGGAATCCTATAATGTGCAAACGGCT    900
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU37770___ro    851 CCTGTTTGTATCAGCGTGATAACAAGGAATCCTATAATGTGCAAACGGCT    900

BSNT_05779___    901 GTCAGCACCAGCTTGTACTTCAATTGTTTTATTTATGAAAGAACAGCAAA    950
                     |||||||||||||||||.||||||||||||||||||||||||||||||||
BSU37770___ro    901 GTCAGCACCAGCTTGTATTTCAATTGTTTTATTTATGAAAGAACAGCAAA    950

BSNT_05779___    951 AGAAATGATGGATTTGCTTATTGAAGTCACTGAGGAAGCATGCCAAGAGA   1000
                     ||||||||||||||||||||||||||||||||||||||||||||..||||
BSU37770___ro    951 AGAAATGATGGATTTGCTTATTGAAGTCACTGAGGAAGCATGCCGGGAGA   1000

BSNT_05779___   1001 CAGAACAAAAATTATCAGATTATTATGAAGAATATGCAAAAAGAGCCAAC   1050
                     |||||||||||||||||||||||||.||||||||||.|||||||||||||
BSU37770___ro   1001 CAGAACAAAAATTATCAGATTATTACGAAGAATATGTAAAAAGAGCCAAC   1050

BSNT_05779___   1051 CTGCCAAAGAAACATTTATCATGGGACATTCAAGTGTATAGCCTGGAGCA   1100
                     |||||||||||||||||||||||||.||||||||||||||||||||||||
BSU37770___ro   1051 CTGCCAAAGAAACATTTATCATGGGGCATTCAAGTGTATAGCCTGGAGCA   1100

BSNT_05779___   1101 ATATTTAGAAAAGCTGAGAAACCGGGGGATAGATCCCGAGCAGTGTATCG   1150
                     |||.|||||||||||||||||||||||.||||||||||||||||||||||
BSU37770___ro   1101 ATACTTAGAAAAGCTGAGAAACCGGGGAATAGATCCCGAGCAGTGTATCG   1150

BSNT_05779___   1151 AGCAGACATTCAAAGCCAACGAGCACCTTGAACTTCGCATGAGATGCTTT   1200
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU37770___ro   1151 AGCAGACATTCAAAGCCAACGAGCACCTTGAACTTCGCATGAGATGCTTT   1200

BSNT_05779___   1201 CAGGCAATCGAAGAGCTTCAAAAGCTTGACCCCGATCAAGGCGCAAAAGT   1250
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU37770___ro   1201 CAGGCAATCGAAGAGCTTCAAAAGCTTGACCCCGATCAAGGCGCAAAAGT   1250

BSNT_05779___   1251 CATTCTATTTTACGCACCTCCTTACCTGCCACATAACTATTTGAAAGAAG   1300
                     ||||||||||||||||||||||||||||||.|||||||||||||||||||
BSU37770___ro   1251 CATTCTATTTTACGCACCTCCTTACCTGCCGCATAACTATTTGAAAGAAG   1300

BSNT_05779___   1301 ATAGCGCAAGAGATCAGCTTTTGCAGCATGTGATTAAAGAAGCGGCTGAC   1350
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU37770___ro   1301 ATAGCGCAAGAGATCAGCTTTTGCAGCATGTGATTAAAGAAGCGGCTGAC   1350

BSNT_05779___   1351 AAAACCGCTGAATCGACAGGCGAAACATTTGTCTTCAAAAAGTTTTTCCC   1400
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU37770___ro   1351 AAAACCGCTGAATCGACAGGCGAAACATTTGTCTTCAAAAAGTTTTTCCC   1400

BSNT_05779___   1401 CTACTTGGCAGACGGCAGTTTTTTATCACTGCACGAAACCGATGGCGAAA   1450
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU37770___ro   1401 CTACTTGGCAGACGGCAGTTTTTTATCACTGCACGAAACCGATGGCGAAA   1450

BSNT_05779___   1451 TTGATTCTTTTATCAGGAACTTTCCTGGGTGGAATATGATTGGGACCATT   1500
                     ||||||||||||||||||||||.|||||||||||||||||||||||||||
BSU37770___ro   1451 TTGATTCTTTTATCAGGAACTTCCCTGGGTGGAATATGATTGGGACCATT   1500

BSNT_05779___   1501 CCGTTCAAAGATATACGCAAGCTGAATATTCCATCCATTAATATGGGTGT   1550
                     |||||||||||.|||||||||||||||||||||||||||||||||||.||
BSU37770___ro   1501 CCGTTCAAAGACATACGCAAGCTGAATATTCCATCCATTAATATGGGCGT   1550

BSNT_05779___   1551 GTACGGAAAAGACGGCCATAAATGGACAGAACGAGTCTATAAACCGTACA   1600
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU37770___ro   1551 GTACGGAAAAGACGGCCATAAATGGACAGAACGAGTCTATAAACCGTACA   1600

BSNT_05779___   1601 CATTTCATGTATTGCCTCTCCTCATACAGCAAACCACCGTTCACCTTTTG   1650
                     |||||||||||||||||||||||||||||||||||||||||||.||||||
BSU37770___ro   1601 CATTTCATGTATTGCCTCTCCTCATACAGCAAACCACCGTTCATCTTTTG   1650

BSNT_05779___   1651 CAAAGCTACCGGATGACCATCACGGCAAAAGAACCAAAGGGGGAAGGATG   1700
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU37770___ro   1651 CAAAGCTACCGGATGACCATCACGGCAAAAGAACCAAAGGGGGAAGGATG   1700

BSNT_05779___   1701 A   1701
                     |
BSU37770___ro   1701 A   1701


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