Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_05778 and BSU37760
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:26:58
# Commandline: needle
# -asequence dna-align/BSNT_05778___rocC.1.22522.seq
# -bsequence dna-align/BSU37760___rocC.2.22522.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_05778___rocC-BSU37760___rocC.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_05778___rocC-BSU37760___rocC.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05778___rocC
# 2: BSU37760___rocC
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1416
# Identity: 1394/1416 (98.4%)
# Similarity: 1394/1416 (98.4%)
# Gaps: 3/1416 ( 0.2%)
# Score: 6894.0
#
#
#=======================================
BSNT_05778___ 1 ATGATGCAGAATCATAAAAATGAATTGCAGCGCAGCATGAAAAGCAGGCA 50
|||||||||||||||||||||||||||||||||||||||||||||||
BSU37760___ro 1 ---ATGCAGAATCATAAAAATGAATTGCAGCGCAGCATGAAAAGCAGGCA 47
BSNT_05778___ 51 TTTGTTTATGATTGCTTTGGGAGGGGTGATTGGCACTGGGCTGTTTCTAG 100
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU37760___ro 48 TTTGTTTATGATTGCTTTGGGAGGGGTGATTGGCACTGGGCTGTTTCTAG 97
BSNT_05778___ 101 GCTCTGGCTTTACCATTAGCCAGGCGGGACCGCTCGGCGCCATTGCCGCG 150
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU37760___ro 98 GCTCTGGCTTTACCATTAGCCAGGCGGGACCGCTCGGCGCCATTGCCGCG 147
BSNT_05778___ 151 TATATCATCGGCGGATTTTTAATGTATCTCGTCATGCTTTGTTTAGGAGA 200
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU37760___ro 148 TATATCATCGGCGGATTTTTAATGTATCTCGTCATGCTTTGTTTAGGAGA 197
BSNT_05778___ 201 ATTGGCTGTTGCCATGCCGGTGGCCGGATCGTTTCAGGCCTACGCCACTA 250
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU37760___ro 198 ATTGGCTGTTGCCATGCCGGTGGCCGGATCGTTTCAGGCCTACGCCACTA 247
BSNT_05778___ 251 AATTTCTGGGACCGTCGACAGGCTTTATGATTGGCTGGCTGTATTGGTTC 300
||||||||||||.|||||||||||||||||||||||||||||||||||||
BSU37760___ro 248 AATTTCTGGGACAGTCGACAGGCTTTATGATTGGCTGGCTGTATTGGTTC 297
BSNT_05778___ 301 AGCTGGGCGAATACAGTGGGGTTAGAGCTGACGTCAGCAGGCATTTTGAT 350
||||||||.||||||||.||||||||||||||||||||||||||||||||
BSU37760___ro 298 AGCTGGGCCAATACAGTAGGGTTAGAGCTGACGTCAGCAGGCATTTTGAT 347
BSNT_05778___ 351 GCAAAGGTGGCTGCCCTCCGTTCCGATCTGGATATGGTGCCTCGTGTTCG 400
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU37760___ro 348 GCAAAGGTGGCTGCCCTCCGTTCCGATCTGGATATGGTGCCTCGTGTTCG 397
BSNT_05778___ 401 GCATCGTCATCTTTTTGATTAATGCGCTCTCTGTCAGAAGCTTTGCAGAA 450
||||||||||||||||||||||||||||||||||||||||||||||.|||
BSU37760___ro 398 GCATCGTCATCTTTTTGATTAATGCGCTCTCTGTCAGAAGCTTTGCGGAA 447
BSNT_05778___ 451 ATGGAATTTTGGTTTTCAAGCATCAAAGTGGCGGCGATCATATTATTTAT 500
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU37760___ro 448 ATGGAATTTTGGTTTTCAAGCATCAAAGTGGCGGCGATCATATTATTTAT 497
BSNT_05778___ 501 TGTGATTGGCGGAGCCGCTGTGTTTGGCTTGATTGACTTTAAAGGCGGAC 550
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU37760___ro 498 TGTGATTGGCGGAGCCGCTGTGTTTGGCTTGATTGACTTTAAAGGCGGAC 547
BSNT_05778___ 551 AGGAGACACCCTTTTTGTCTAACTTTATGACTGATAGAGGACTTTTCCCT 600
||||||||||||||||||||||||||||||||||||||||.|||||||||
BSU37760___ro 548 AGGAGACACCCTTTTTGTCTAACTTTATGACTGATAGAGGGCTTTTCCCT 597
BSNT_05778___ 601 AATGGGGTGCTGGCCGTTATGTTTACGCTGGTCATGGTGAACTTCTCGTT 650
||||||||||||||||||||||||||||||||||||||.|||||||||||
BSU37760___ro 598 AATGGGGTGCTGGCCGTTATGTTTACGCTGGTCATGGTAAACTTCTCGTT 647
BSNT_05778___ 651 CCAGGGAACGGAGCTTGTCGGCATTGCGGCAGGGGAAAGTGAAAGCCCGG 700
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU37760___ro 648 CCAGGGAACGGAGCTTGTCGGCATTGCGGCAGGGGAAAGTGAAAGCCCGG 697
BSNT_05778___ 701 AAAAAACACTGCCAAAGTCCATTCGAAATGTCATTTGGCGTACGCTGTTT 750
|||||||||||||||||||||||||||||||.||||||||.|||||||||
BSU37760___ro 698 AAAAAACACTGCCAAAGTCCATTCGAAATGTTATTTGGCGCACGCTGTTT 747
BSNT_05778___ 751 TTCTTTGTGCTCGCTATGTTCGTCTTGGTTGCCATCCTTCCGTACAAAAC 800
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU37760___ro 748 TTCTTTGTGCTCGCTATGTTCGTCTTGGTTGCCATCCTTCCGTACAAAAC 797
BSNT_05778___ 801 GGCGGGGGTGATTGAAAGCCCATTTGTAGCGGTACTCGATCAAATCGGCA 850
|||||||||||||||||||||.||||||||.|||||||||||||||||||
BSU37760___ro 798 GGCGGGGGTGATTGAAAGCCCGTTTGTAGCAGTACTCGATCAAATCGGCA 847
BSNT_05778___ 851 TCCCATTTTCGGCAGATATCATGAATTTTGTCATCTTAACAGCCATTTTA 900
|||||||||||||||||||||||||.||||||||||||||.|||||||||
BSU37760___ro 848 TCCCATTTTCGGCAGATATCATGAACTTTGTCATCTTAACGGCCATTTTA 897
BSNT_05778___ 901 TCTGTTGCTAATTCGGGGTTGTATGCGGCGTCGCGTATGATGTGGTCACT 950
|||||||||||||||||.||||||||||||||||||||||||||||||||
BSU37760___ro 898 TCTGTTGCTAATTCGGGATTGTATGCGGCGTCGCGTATGATGTGGTCACT 947
BSNT_05778___ 951 TTCATCAAATCAAATGGGTCCATCCTTTCTCACCAGACTGACAAAAAAAG 1000
|||||||||||||||||||||.||||||||||||||||||||||||||||
BSU37760___ro 948 TTCATCAAATCAAATGGGTCCCTCCTTTCTCACCAGACTGACAAAAAAAG 997
BSNT_05778___ 1001 GCGTGCCGATGAATGCCCTGCTGATTACGCTAGGCATTTCAGGCTGTTCG 1050
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU37760___ro 998 GCGTGCCGATGAATGCCCTGCTGATTACGCTAGGCATTTCAGGCTGTTCG 1047
BSNT_05778___ 1051 CTGCTGACAAGTGTCATGGCCGCAGAAACAGTGTATTTATGGTGTATCTC 1100
||||||||||||||||||||.|||||||||||||||||||||||||||||
BSU37760___ro 1048 CTGCTGACAAGTGTCATGGCTGCAGAAACAGTGTATTTATGGTGTATCTC 1097
BSNT_05778___ 1101 AATCTCGGGCATGGTGACAGTTGTCGCGTGGATGTCCATTTGTGCGTCGC 1150
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU37760___ro 1098 AATCTCGGGCATGGTGACAGTTGTCGCGTGGATGTCCATTTGTGCGTCGC 1147
BSNT_05778___ 1151 AATTTTTCTTTCGCAGACGTTTCCTTGCTGAAGGCGGAAATGTGAATGAT 1200
||||||||||||||||.||||||||.||.|||||||||||||||||||||
BSU37760___ro 1148 AATTTTTCTTTCGCAGGCGTTTCCTGGCAGAAGGCGGAAATGTGAATGAT 1197
BSNT_05778___ 1201 CTGGAGTTCAGAACGCCGCTTTATCCGCTAGTCCCGATTCTCGGATTTTG 1250
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU37760___ro 1198 CTGGAGTTCAGAACGCCGCTTTATCCGCTAGTCCCGATTCTCGGATTTTG 1247
BSNT_05778___ 1251 TTTATATGGCTGCGTGTTGATCAGCCTTATTTTCATTCCGGATCAAAGAA 1300
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU37760___ro 1248 TTTATATGGCTGCGTGTTGATCAGCCTTATTTTCATTCCGGATCAAAGAA 1297
BSNT_05778___ 1301 TTGGCTTATACTGCGGTGTGCCGATCATTATTTTCTGTTATGCATACTAT 1350
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU37760___ro 1298 TTGGCTTATACTGCGGTGTGCCGATCATTATTTTCTGTTATGCATACTAT 1347
BSNT_05778___ 1351 CATCTAAGCATCAAAAAGCGTATAAATCATGAACCGATTGAAAAAAAGCA 1400
|||||||||||||||||||||||||||||||||.||||||||||||||||
BSU37760___ro 1348 CATCTAAGCATCAAAAAGCGTATAAATCATGAAACGATTGAAAAAAAGCA 1397
BSNT_05778___ 1401 GACAGAGGCGCAATAG 1416
||||||||||||||||
BSU37760___ro 1398 GACAGAGGCGCAATAG 1413
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