Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_05738 and BSU37520

See Amino acid alignment / Visit BSNT_05738 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:26:53
# Commandline: needle
#    -asequence dna-align/BSNT_05738___ywhD.1.22522.seq
#    -bsequence dna-align/BSU37520___ywhD.2.22522.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_05738___ywhD-BSU37520___ywhD.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_05738___ywhD-BSU37520___ywhD.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05738___ywhD
# 2: BSU37520___ywhD
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 519
# Identity:     514/519 (99.0%)
# Similarity:   514/519 (99.0%)
# Gaps:           0/519 ( 0.0%)
# Score: 2550.0
# 
#
#=======================================

BSNT_05738___      1 ATGGAAGAAAAAAAGAAAAAATCAATCGGGTTTAATATTATCAAAAGTGA     50
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU37520___yw      1 ATGGAAGAAAAAAAGAAAAAATCAATCGGGTTTAATATTATCAAAAGTGA     50

BSNT_05738___     51 TCCGACAGACGGACACGGCGGTTTTGGCGTAGGGGCACTCAGCCTTGATA    100
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU37520___yw     51 TCCGACAGACGGACACGGCGGTTTTGGCGTAGGGGCACTCAGCCTTGATA    100

BSNT_05738___    101 ACATTTCTCCCGTATTCGTTGATGTAGAAGAAAAAGAAGCGTTCGTAGAC    150
                     ||||||||||||||||||||||||||||.|||||||||||||||||||||
BSU37520___yw    101 ACATTTCTCCCGTATTCGTTGATGTAGAGGAAAAAGAAGCGTTCGTAGAC    150

BSNT_05738___    151 ATCGGCGCCATGCATGCCCGCAGCACCGTTGAAAAAGGAATTAAATTTCT    200
                     ||||||||.|||||||||||||||||||||||||||||||||||||||||
BSU37520___yw    151 ATCGGCGCTATGCATGCCCGCAGCACCGTTGAAAAAGGAATTAAATTTCT    200

BSNT_05738___    201 CCCGAATAAAGAAGAAGTGCCGAACGGAAAACCATACTGGCTTGTGTGGG    250
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU37520___yw    201 CCCGAATAAAGAAGAAGTGCCGAACGGAAAACCATACTGGCTTGTGTGGG    250

BSNT_05738___    251 TAACGATTGACAGAAAAGAAGAGGGGCCTTATTACGCTGGTGTGACAGCC    300
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU37520___yw    251 TAACGATTGACAGAAAAGAAGAGGGGCCTTATTACGCTGGTGTGACAGCC    300

BSNT_05738___    301 TGTGAAATGACGGTCGACAGAAGCATCAGAAGAGGCTACAAGTCGCTGCC    350
                     ||||||||||||||||||||||||||||||||||||||||||||.|||||
BSU37520___yw    301 TGTGAAATGACGGTCGACAGAAGCATCAGAAGAGGCTACAAGTCACTGCC    350

BSNT_05738___    351 TGAGCATGTGAATTTGATGGATAAATCCATGAAACGGAAAATCATCGTTG    400
                     |||||||||||||.||||||||||||||||||||||||||||||||||||
BSU37520___yw    351 TGAGCATGTGAATCTGATGGATAAATCCATGAAACGGAAAATCATCGTTG    400

BSNT_05738___    401 ATAAAATGGACGACAGCTCGAAGCGTGTACTAGGCGAATTTCTGAAAAAG    450
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU37520___yw    401 ATAAAATGGACGACAGCTCGAAGCGTGTACTAGGCGAATTTCTGAAAAAG    450

BSNT_05738___    451 CATGATCAGGGCCTATGGGACCGTTCCTCAGATGAGTTAAAAACGAGCCT    500
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU37520___yw    451 CATGATCAGGGCCTATGGGACCGTTCCTCAGATGAGTTAAAAACGAGCCT    500

BSNT_05738___    501 GCTTCCGGAAAACAATTAA    519
                     ||||||.||||||||||||
BSU37520___yw    501 GCTTCCAGAAAACAATTAA    519


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