Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_05729 and BSU37460
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:26:52
# Commandline: needle
# -asequence dna-align/BSNT_05729___rapF.1.22522.seq
# -bsequence dna-align/BSU37460___rapF.2.22522.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_05729___rapF-BSU37460___rapF.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_05729___rapF-BSU37460___rapF.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05729___rapF
# 2: BSU37460___rapF
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1146
# Identity: 1145/1146 (99.9%)
# Similarity: 1145/1146 (99.9%)
# Gaps: 0/1146 ( 0.0%)
# Score: 5721.0
#
#
#=======================================
BSNT_05729___ 1 GTGACAGGTGTCATATCTTCTTCTTCCATCGGAGAAAAGATTAACGAATG 50
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU37460___ra 1 GTGACAGGTGTCATATCTTCTTCTTCCATCGGAGAAAAGATTAACGAATG 50
BSNT_05729___ 51 GTATATGTACATACGCCGATTCAGCATACCCGATGCAGAATATTTGCGAC 100
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU37460___ra 51 GTATATGTACATACGCCGATTCAGCATACCCGATGCAGAATATTTGCGAC 100
BSNT_05729___ 101 GAGAAATCAAGCAAGAGCTGGATCAAATGGAAGAAGATCAAGACCTTCAT 150
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU37460___ra 101 GAGAAATCAAGCAAGAGCTGGATCAAATGGAAGAAGATCAAGACCTTCAT 150
BSNT_05729___ 151 TTGTACTATTCACTGATGGAGTTTCGGCACAACCTAATGCTTGAGTACCT 200
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU37460___ra 151 TTGTACTATTCACTGATGGAGTTTCGGCACAACCTAATGCTTGAGTACCT 200
BSNT_05729___ 201 TGAACCGTTAGAAAAAATGAGGATTGAGGAACAGCCGAGACTGTCTGATC 250
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU37460___ra 201 TGAACCGTTAGAAAAAATGAGGATTGAGGAACAGCCGAGACTGTCTGATC 250
BSNT_05729___ 251 TGCTGCTTGAGATTGATAAAAAACAGGCTCGTTTAACTGGTCTGCTTGAG 300
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU37460___ra 251 TGCTGCTTGAGATTGATAAAAAACAGGCTCGTTTAACTGGTCTGCTTGAG 300
BSNT_05729___ 301 TACTATTTTAACTTCTTCAGAGGCATGTACGAGCTGGACCAGCGGGAATA 350
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU37460___ra 301 TACTATTTTAACTTCTTCAGAGGCATGTACGAGCTGGACCAGCGGGAATA 350
BSNT_05729___ 351 TCTGTCGGCTATTAAATTTTTCAAAAAGGCCGAAAGCAAGCTGATATTCG 400
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU37460___ra 351 TCTGTCGGCTATTAAATTTTTCAAAAAGGCCGAAAGCAAGCTGATATTCG 400
BSNT_05729___ 401 TTAAGGATCGGATAGAGAAAGCTGAGTTTTTCTTTAAGATGTCTGAATCT 450
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU37460___ra 401 TTAAGGATCGGATAGAGAAAGCTGAGTTTTTCTTTAAGATGTCTGAATCT 450
BSNT_05729___ 451 TATTACTATATGAAACAAACGTATTTTTCAATGGACTATGCACGGCAAGC 500
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU37460___ra 451 TATTACTATATGAAACAAACGTATTTTTCAATGGACTATGCACGGCAAGC 500
BSNT_05729___ 501 ATATGAAATATACAAAGAACATGAAGCTTATAATATAAGATTGCTGCAGT 550
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU37460___ra 501 ATATGAAATATACAAAGAACATGAAGCTTATAATATAAGATTGCTGCAGT 550
BSNT_05729___ 551 GTCATTCTTTATTTGCCACCAATTTTTTAGATTTAAAACAGTATGAGGAT 600
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU37460___ra 551 GTCATTCTTTATTTGCCACCAATTTTTTAGATTTAAAACAGTATGAGGAT 600
BSNT_05729___ 601 GCCATCTCACATTTTCAAAAAGCTTATTCTATGGCAGAAGCTGAAAAGCA 650
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU37460___ra 601 GCCATCTCACATTTTCAAAAAGCTTATTCTATGGCAGAAGCTGAAAAGCA 650
BSNT_05729___ 651 GCCCCAATTAATGGGGAGAACTTTGTACAATATCGGGCTTTGTAAAAACA 700
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU37460___ra 651 GCCCCAATTAATGGGGAGAACTTTGTACAATATCGGGCTTTGTAAAAACA 700
BSNT_05729___ 701 GCCAAAGCCAATATGAGGATGCCATACCTTATTTCAAAAGAGCAATAGCT 750
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU37460___ra 701 GCCAAAGCCAATATGAGGATGCCATACCTTATTTCAAAAGAGCAATAGCT 750
BSNT_05729___ 751 GTTTTTGAAGAATCAAATATTCTTCCTTCCTTACCTCAAGCGTATTTTTT 800
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU37460___ra 751 GTTTTTGAAGAATCAAATATTCTTCCTTCCTTACCTCAAGCGTATTTTTT 800
BSNT_05729___ 801 AATTACACAGATCCATTATAAATTAGGAAAAATGGATAAAGCTCATGAAT 850
|||||||||||||||||||||||||||||||||.||||||||||||||||
BSU37460___ra 801 AATTACACAGATCCATTATAAATTAGGAAAAATAGATAAAGCTCATGAAT 850
BSNT_05729___ 851 ATCATAGTAAGGGAATGGCTTATTCACAAAAGGCCGGAGATGTAATATAT 900
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU37460___ra 851 ATCATAGTAAGGGAATGGCTTATTCACAAAAGGCCGGAGATGTAATATAT 900
BSNT_05729___ 901 TTATCAGAGTTTGAATTTTTGAAATCTTTATACTTATCAGGCCCGGATGA 950
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU37460___ra 901 TTATCAGAGTTTGAATTTTTGAAATCTTTATACTTATCAGGCCCGGATGA 950
BSNT_05729___ 951 AGAAGCAATTCAAGGATTTTTTGATTTTCTCGAAAGTAAAATGTTGTATG 1000
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU37460___ra 951 AGAAGCAATTCAAGGATTTTTTGATTTTCTCGAAAGTAAAATGTTGTATG 1000
BSNT_05729___ 1001 CTGATCTTGAAGATTTCGCTATTGATGTGGCAAAATATTATCATGAACGT 1050
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU37460___ra 1001 CTGATCTTGAAGATTTCGCTATTGATGTGGCAAAATATTATCATGAACGT 1050
BSNT_05729___ 1051 AAAAATTTTCAAAAAGCTTCTGCTTATTTTTTGAAGGTGGAACAAGTAAG 1100
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU37460___ra 1051 AAAAATTTTCAAAAAGCTTCTGCTTATTTTTTGAAGGTGGAACAAGTAAG 1100
BSNT_05729___ 1101 GCAACTTATTCAAGGAGGAGTGAGTTTGTATGAAATTGAAGTCTAA 1146
||||||||||||||||||||||||||||||||||||||||||||||
BSU37460___ra 1101 GCAACTTATTCAAGGAGGAGTGAGTTTGTATGAAATTGAAGTCTAA 1146
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