Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_05687 and BSU37220

See Amino acid alignment / Visit BSNT_05687 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:26:45
# Commandline: needle
#    -asequence dna-align/BSNT_05687___ywjB.1.22522.seq
#    -bsequence dna-align/BSU37220___ywjB.2.22522.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_05687___ywjB-BSU37220___ywjB.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_05687___ywjB-BSU37220___ywjB.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05687___ywjB
# 2: BSU37220___ywjB
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 525
# Identity:     521/525 (99.2%)
# Similarity:   521/525 (99.2%)
# Gaps:           0/525 ( 0.0%)
# Score: 2589.0
# 
#
#=======================================

BSNT_05687___      1 ATGGAAAGAAAAACTGTGCTGTACATTGCTGTTTCATTGGATGGGATGAT     50
                     |||||||||||||||||||||||||||||||||||||||||.||||||||
BSU37220___yw      1 ATGGAAAGAAAAACTGTGCTGTACATTGCTGTTTCATTGGACGGGATGAT     50

BSNT_05687___     51 CGCAAAAGAAGATGGAAGCATCGATTGGCTGGATGAATTTGAAGGTGAAG    100
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU37220___yw     51 CGCAAAAGAAGATGGAAGCATCGATTGGCTGGATGAATTTGAAGGTGAAG    100

BSNT_05687___    101 GTGACAACGGCTACAGTGATTTTTATCAGACTGTTGATACAGTCATTCTA    150
                     |||||||||||||||||||||||||||||||||||||||||||||||.||
BSU37220___yw    101 GTGACAACGGCTACAGTGATTTTTATCAGACTGTTGATACAGTCATTTTA    150

BSNT_05687___    151 GGGCGGGGCACATATGAGCACGTTAAAGTGCTAACACCGGTTTTCCCATA    200
                     ||||||.||||||||||||||||||||||||||||||||||||||||.||
BSU37220___yw    151 GGGCGGAGCACATATGAGCACGTTAAAGTGCTAACACCGGTTTTCCCGTA    200

BSNT_05687___    201 TCAGGATAAAACCTGCTATGTTTTTACAGGATCGCCCGACAGTTATCAAG    250
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU37220___yw    201 TCAGGATAAAACCTGCTATGTTTTTACAGGATCGCCCGACAGTTATCAAG    250

BSNT_05687___    251 ATGAACATGTGACGTTTATCAATGAGGGAGCCAGAGCCTTCACTGCCCGT    300
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU37220___yw    251 ATGAACATGTGACGTTTATCAATGAGGGAGCCAGAGCCTTCACTGCCCGT    300

BSNT_05687___    301 TTGAAACAGGAAAAAGGCTCAAACATCTGGATAGCTGGCGGGGCAGAGCT    350
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU37220___yw    301 TTGAAACAGGAAAAAGGCTCAAACATCTGGATAGCTGGCGGGGCAGAGCT    350

BSNT_05687___    351 TGTGAATGACTTTATGAAAGAAGATGCCATCGACGAATTCATCATCACTG    400
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU37220___yw    351 TGTGAATGACTTTATGAAAGAAGATGCCATCGACGAATTCATCATCACTG    400

BSNT_05687___    401 TTATTCCCGTCGTTTTAGGAAGCGGCATCCCGCTGTTTCACGAACTAACA    450
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU37220___yw    401 TTATTCCCGTCGTTTTAGGAAGCGGCATCCCGCTGTTTCACGAACTAACA    450

BSNT_05687___    451 AATGAAACAAAACTGCGGTTAAAAGGGACAAAACAATTTGGACAAGCGGT    500
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU37220___yw    451 AATGAAACAAAACTGCGGTTAAAAGGGACAAAACAATTTGGACAAGCGGT    500

BSNT_05687___    501 TCAGCTCCATTATGTAAGAGCATAA    525
                     |||||||||||||||||||||||||
BSU37220___yw    501 TCAGCTCCATTATGTAAGAGCATAA    525


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