Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_05685 and BSU37210

See Amino acid alignment / Visit BSNT_05685 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:26:45
# Commandline: needle
#    -asequence dna-align/BSNT_05685.1.22522.seq
#    -bsequence dna-align/BSU37210___ywjC.2.22522.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_05685-BSU37210___ywjC.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_05685-BSU37210___ywjC.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05685
# 2: BSU37210___ywjC
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 273
# Identity:     199/273 (72.9%)
# Similarity:   199/273 (72.9%)
# Gaps:          72/273 (26.4%)
# Score: 987.0
# 
#
#=======================================

BSNT_05685         0 --------------------------------------------------      0
                                                                       
BSU37210___yw      1 ATGAAAAATATCAAGTCTCTGAAAGTAGCCGCACAGGCCTTTACTTTAAG     50

BSNT_05685         1 ----------------------ATGTGCCATTCCGGAAGCCACGAGGTTT     28
                                           ||||||||||||||||||||||||||||
BSU37210___yw     51 AAATTTGATTCATCTTTATAAAATGTGCCATTCCGGAAGCCACGAGGTTT    100

BSNT_05685        29 ATATTTATTCAAAGAAAACGATGTGCAAAATCAAAAGCTTAATTGAGCTT     78
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU37210___yw    101 ATATTTATTCAAAGAAAACGATGTGCAAAATCAAAAGCTTAATTGAGCTT    150

BSNT_05685        79 GAAACATTCCGCATGGCTCATAATGAAAAGGAATATTTGATCGTAGTTGA    128
                     |||||.||||||||||||||||||||||||||||||.|||||||||||||
BSU37210___yw    151 GAAACGTTCCGCATGGCTCATAATGAAAAGGAATATCTGATCGTAGTTGA    200

BSNT_05685       129 AGGAACAAAAGCATCACAGCTCATTGAAAAATTCCAAAATCTCATCGAGC    178
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU37210___yw    201 AGGAACAAAAGCATCACAGCTCATTGAAAAATTCCAAAATCTCATCGAGC    250

BSNT_05685       179 CTGCTGAGAGAGAAGCGCTCTAA    201
                     |||||||||||||||||||||||
BSU37210___yw    251 CTGCTGAGAGAGAAGCGCTCTAA    273


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