Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_05677 and BSU37160

See Amino acid alignment / Visit BSNT_05677 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:26:44
# Commandline: needle
#    -asequence dna-align/BSNT_05677___rpoE.1.22522.seq
#    -bsequence dna-align/BSU37160___rpoE.2.22522.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_05677___rpoE-BSU37160___rpoE.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_05677___rpoE-BSU37160___rpoE.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05677___rpoE
# 2: BSU37160___rpoE
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 522
# Identity:     500/522 (95.8%)
# Similarity:   500/522 (95.8%)
# Gaps:          15/522 ( 2.9%)
# Score: 2455.0
# 
#
#=======================================

BSNT_05677___      1 TTGGGTATCAAACAATATTCACAGGAAGAGCTAAAGGAAATGGCTTTAGT     50
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU37160___rp      1 TTGGGTATCAAACAATATTCACAGGAAGAGCTAAAGGAAATGGCTTTAGT     50

BSNT_05677___     51 TGAAATCGCTCACGAATTATTTGAAGAACATAAAAAACCAGTTCCTTTTC    100
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU37160___rp     51 TGAAATCGCTCACGAATTATTTGAAGAACATAAAAAACCAGTTCCTTTTC    100

BSNT_05677___    101 AGGAGCTTTTAAATGAAATCGCATCTTTGCTCGGCGTGAAAAAAGAAGAG    150
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU37160___rp    101 AGGAGCTTTTAAATGAAATCGCATCTTTGCTCGGCGTGAAAAAAGAAGAG    150

BSNT_05677___    151 CTTGGAGACCGCATCGCTCAATTTTATACAGATTTAAACATTGACGGCCG    200
                     ||||||||||||||.|||||||||||||||||||||||||||||||||||
BSU37160___rp    151 CTTGGAGACCGCATTGCTCAATTTTATACAGATTTAAACATTGACGGCCG    200

BSNT_05677___    201 CTTCCTGGCGCTATCTGACCAGACGTGGGGGCTTCGCAGCTGGTATCCGT    250
                     ||||||||||||.|||||||||||||||||||||||||||||||||||.|
BSU37160___rp    201 CTTCCTGGCGCTTTCTGACCAGACGTGGGGGCTTCGCAGCTGGTATCCTT    250

BSNT_05677___    251 ATGATCAGCTTGATGAAGAAACTCAGCCGACAGTCAAGGCGAAAAAGAAA    300
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU37160___rp    251 ATGATCAGCTTGATGAAGAAACTCAGCCGACAGTCAAGGCGAAAAAGAAA    300

BSNT_05677___    301 AAAGCGAAGAAAGCAGTCGAAGAAGATCTTGATCTTGACGAGTTTGAAGA    350
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU37160___rp    301 AAAGCGAAGAAAGCAGTCGAAGAAGATCTTGATCTTGACGAGTTTGAAGA    350

BSNT_05677___    351 GATCGACGAAGACGACCTTGATTTGGATGAAGTTGAGGAAGAACTCGATC    400
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU37160___rp    351 GATCGACGAAGACGACCTTGATTTGGATGAAGTTGAGGAAGAACTCGATC    400

BSNT_05677___    401 TTGAAGCCGACGATTTTGACGATGAAGATCTTGACGAAGACGACGACGAT    450
                     ||||||||||||||||||||||.|||||||||||.|||||||||||.|||
BSU37160___rp    401 TTGAAGCCGACGATTTTGACGAAGAAGATCTTGATGAAGACGACGATGAT    450

BSNT_05677___    451 CTTGAGATCGAAGAAGATATTGTTGATGAA---------------GATGA    485
                     |||||||||||||||||||||.||||||||               |||||
BSU37160___rp    451 CTTGAGATCGAAGAAGATATTATTGATGAAGATGATGAAGACTATGATGA    500

BSNT_05677___    486 TGAAGAAGAGGAAATTAAATAG    507
                     ||||||||||||||||||||||
BSU37160___rp    501 TGAAGAAGAGGAAATTAAATAG    522


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