Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_05646 and BSU36960

See Amino acid alignment / Visit BSNT_05646 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:26:41
# Commandline: needle
#    -asequence dna-align/BSNT_05646___ywlB.1.22522.seq
#    -bsequence dna-align/BSU36960___ywlB.2.22522.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_05646___ywlB-BSU36960___ywlB.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_05646___ywlB-BSU36960___ywlB.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05646___ywlB
# 2: BSU36960___ywlB
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 444
# Identity:     442/444 (99.5%)
# Similarity:   442/444 (99.5%)
# Gaps:           0/444 ( 0.0%)
# Score: 2202.0
# 
#
#=======================================

BSNT_05646___      1 ATGTTTTATCAACTGCGGGTGGCAAGGGAAAAAGACGGAGATGTGCTCGA     50
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU36960___yw      1 ATGTTTTATCAACTGCGGGTGGCAAGGGAAAAAGACGGAGATGTGCTCGA     50

BSNT_05646___     51 GGCATTTTTAAAACAGGCAAAAACCAGCTATGAAGGCGTGAAAGAAGGCT    100
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU36960___yw     51 GGCATTTTTAAAACAGGCAAAAACCAGCTATGAAGGCGTGAAAGAAGGCT    100

BSNT_05646___    101 TCACTCAATTTCTTATGCTGGAGGACAGTGAGAAAAACATTGCCGGATGC    150
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU36960___yw    101 TCACTCAATTTCTTATGCTGGAGGACAGTGAGAAAAACATTGCCGGATGC    150

BSNT_05646___    151 CTCGGTATTGAAAAAATAAGCTGTGACCAGGGGCTGCTGCGATCACTTGT    200
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU36960___yw    151 CTCGGTATTGAAAAAATAAGCTGTGACCAGGGGCTGCTGCGATCACTTGT    200

BSNT_05646___    201 CATATCGGACAAGCTTCACCAAGGCCATATCGTCACGCTTTTTCAAAGCA    250
                     |||||||||||||||||||||||||||.||||||||||||||||||||||
BSU36960___yw    201 CATATCGGACAAGCTTCACCAAGGCCACATCGTCACGCTTTTTCAAAGCA    250

BSNT_05646___    251 TGGAGGTGCTGTGCGAAAAGCATCAGATCAAAACCGTGTACCTAGTAGCA    300
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU36960___yw    251 TGGAGGTGCTGTGCGAAAAGCATCAGATCAAAACCGTGTACCTAGTAGCA    300

BSNT_05646___    301 AATCAGCATTCCTCTGCGGACTTTCTGACGGCCATGGGTTTTGAAAGAGC    350
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU36960___yw    301 AATCAGCATTCCTCTGCGGACTTTCTGACGGCCATGGGTTTTGAAAGAGC    350

BSNT_05646___    351 TGAGAGTGTACCGGAGGAGCTGTTTTCTTCTGATCACTTCTGTGATTCGC    400
                     |||||||||||||||||||||||||||||||||||||||||||||.||||
BSU36960___yw    351 TGAGAGTGTACCGGAGGAGCTGTTTTCTTCTGATCACTTCTGTGAATCGC    400

BSNT_05646___    401 GGCAAACAGAAGGAGCCGTTTTGATGAAAAAAGCGTCTGGATAA    444
                     ||||||||||||||||||||||||||||||||||||||||||||
BSU36960___yw    401 GGCAAACAGAAGGAGCCGTTTTGATGAAAAAAGCGTCTGGATAA    444


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