Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

Home

About

Browser

Genes

Download

Publications

DNA alignment: BSNT_05639 and BSU36920

See Amino acid alignment / Visit BSNT_05639 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:26:40
# Commandline: needle
#    -asequence dna-align/BSNT_05639___rpiB.1.22522.seq
#    -bsequence dna-align/BSU36920___ywlF.2.22522.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_05639___rpiB-BSU36920___ywlF.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_05639___rpiB-BSU36920___ywlF.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05639___rpiB
# 2: BSU36920___ywlF
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 450
# Identity:     449/450 (99.8%)
# Similarity:   449/450 (99.8%)
# Gaps:           0/450 ( 0.0%)
# Score: 2241.0
# 
#
#=======================================

BSNT_05639___      1 ATGAAAGTAGCCATTGCATCGGATCATGGCGGCGTTCACATTCGAAATGA     50
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU36920___yw      1 ATGAAAGTAGCCATTGCATCGGATCATGGCGGCGTTCACATTCGAAATGA     50

BSNT_05639___     51 AATCAAAGAGTTAATGGACGAATTGCAAATTGAATATATTGATATGGGCT    100
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU36920___yw     51 AATCAAAGAGTTAATGGACGAATTGCAAATTGAATATATTGATATGGGCT    100

BSNT_05639___    101 GTGACTGCGGCAGCGGCTCTGTCGATTATCCGGATTATGCTTTTCCGGTG    150
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU36920___yw    101 GTGACTGCGGCAGCGGCTCTGTCGATTATCCGGATTATGCTTTTCCGGTG    150

BSNT_05639___    151 GCCGAAAAAGTGGTTAGCGGCGAAGTTGACAGAGGCATTTTAATTTGCGG    200
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU36920___yw    151 GCCGAAAAAGTGGTTAGCGGCGAAGTTGACAGAGGCATTTTAATTTGCGG    200

BSNT_05639___    201 GACAGGCATCGGCATGAGCATTTCCGCTAATAAAGTAAAAGGGATTCGCT    250
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU36920___yw    201 GACAGGCATCGGCATGAGCATTTCCGCTAATAAAGTAAAAGGGATTCGCT    250

BSNT_05639___    251 GCGCGCTGGCGCACGATACCTTCAGCGCGAAGGCGACGAGGGAGCATAAT    300
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU36920___yw    251 GCGCGCTGGCGCACGATACCTTCAGCGCGAAGGCGACGAGGGAGCATAAT    300

BSNT_05639___    301 GACACAAACATCCTTGCGATGGGTGAACGGGTGATCGGACCTGGTTTGGC    350
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU36920___yw    301 GACACAAACATCCTTGCGATGGGTGAACGGGTGATCGGACCTGGTTTGGC    350

BSNT_05639___    351 TCGGGAAATCGCAAAAACCTGGCTGACTACTGAGTTTACCGGGGGAAGAC    400
                     |||||||||||||||||.||||||||||||||||||||||||||||||||
BSU36920___yw    351 TCGGGAAATCGCAAAAATCTGGCTGACTACTGAGTTTACCGGGGGAAGAC    400

BSNT_05639___    401 ACCAAACGCGTATTGGAAAAATCTCCGATTATGAAGAGAAAAACCTGTAG    450
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU36920___yw    401 ACCAAACGCGTATTGGAAAAATCTCCGATTATGAAGAGAAAAACCTGTAG    450


#---------------------------------------
#---------------------------------------

Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.