Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_05627 and BSU36850

See Amino acid alignment / Visit BSNT_05627 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:26:39
# Commandline: needle
#    -asequence dna-align/BSNT_05627___atpF.1.22522.seq
#    -bsequence dna-align/BSU36850___atpF.2.22522.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_05627___atpF-BSU36850___atpF.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_05627___atpF-BSU36850___atpF.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05627___atpF
# 2: BSU36850___atpF
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 513
# Identity:     511/513 (99.6%)
# Similarity:   511/513 (99.6%)
# Gaps:           0/513 ( 0.0%)
# Score: 2547.0
# 
#
#=======================================

BSNT_05627___      1 ATGTCTCAATTACCACTTGAACTAGGATTGTCGTTTAACGGCGGAGATAT     50
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU36850___at      1 ATGTCTCAATTACCACTTGAACTAGGATTGTCGTTTAACGGCGGAGATAT     50

BSNT_05627___     51 CCTGTTCCAACTGTTAGCTATGTTAATCTTATTAGCGCTTCTGAAGAAAT    100
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU36850___at     51 CCTGTTCCAACTGTTAGCTATGTTAATCTTATTAGCGCTTCTGAAGAAAT    100

BSNT_05627___    101 ACGCTTTAGGGCCGCTATTAAACATAATGAAACAGCGTGAAGACCACATC    150
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU36850___at    101 ACGCTTTAGGGCCGCTATTAAACATAATGAAACAGCGTGAAGACCACATC    150

BSNT_05627___    151 GCTGGAGAAATTACGTCTGCTGAAGAAAAAAATAAAGAAGCGCAGCAGCT    200
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU36850___at    151 GCTGGAGAAATTACGTCTGCTGAAGAAAAAAATAAAGAAGCGCAGCAGCT    200

BSNT_05627___    201 TATTGAAGAGCAGCGCGTTCTTTTAAAAGAAGCAAGACAGGAATCCCAAA    250
                     .|||||||||||||||||||||||||||||||||||||||||||||||||
BSU36850___at    201 GATTGAAGAGCAGCGCGTTCTTTTAAAAGAAGCAAGACAGGAATCCCAAA    250

BSNT_05627___    251 CTCTTATCGAAAACGCAAAGAAACTGGGAGAGAAGCAAAAAGAAGAGATT    300
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU36850___at    251 CTCTTATCGAAAACGCAAAGAAACTGGGAGAGAAGCAAAAAGAAGAGATT    300

BSNT_05627___    301 ATTCAGGCTGCACGTGCAGAATCTGAACGTCTGAAAGAAGCAGCAAGAAC    350
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU36850___at    301 ATTCAGGCTGCACGTGCAGAATCTGAACGTCTGAAAGAAGCAGCAAGAAC    350

BSNT_05627___    351 TGAAATCGTGAAGGAAAAAGAACAGGCGGTTTCTGCTCTCCGTGAGCAAG    400
                     ||||||||||||||||||.|||||||||||||||||||||||||||||||
BSU36850___at    351 TGAAATCGTGAAGGAAAAGGAACAGGCGGTTTCTGCTCTCCGTGAGCAAG    400

BSNT_05627___    401 TAGCGTCTCTTTCTGTCATGATTGCGTCGAAAGTGATCGAAAAAGAACTG    450
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU36850___at    401 TAGCGTCTCTTTCTGTCATGATTGCGTCGAAAGTGATCGAAAAAGAACTG    450

BSNT_05627___    451 GATGAACAAGCGCAAGAGAAATTGATCCAGGACTATCTTAAAGAGGTAGG    500
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU36850___at    451 GATGAACAAGCGCAAGAGAAATTGATCCAGGACTATCTTAAAGAGGTAGG    500

BSNT_05627___    501 AGAAAGCCGATGA    513
                     |||||||||||||
BSU36850___at    501 AGAAAGCCGATGA    513


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