Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_05626 and BSU36840

See Amino acid alignment / Visit BSNT_05626 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:26:39
# Commandline: needle
#    -asequence dna-align/BSNT_05626___atpH.1.22522.seq
#    -bsequence dna-align/BSU36840___atpH.2.22522.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_05626___atpH-BSU36840___atpH.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_05626___atpH-BSU36840___atpH.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05626___atpH
# 2: BSU36840___atpH
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 546
# Identity:     535/546 (98.0%)
# Similarity:   535/546 (98.0%)
# Gaps:           0/546 ( 0.0%)
# Score: 2631.0
# 
#
#=======================================

BSNT_05626___      1 ATGAGTGGATCAGCTGTCTCTAAACGATATGCATCAGCTCTTTTTGATAT     50
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU36840___at      1 ATGAGTGGATCAGCTGTCTCTAAACGATATGCATCAGCTCTTTTTGATAT     50

BSNT_05626___     51 AGCCAATGAGTCCGCTCAGCTGAATCAAGTAGAAGAAGAGCTAACTGTTG    100
                     ||||||||||||||||||||||||||||||||||||||||||||.|||||
BSU36840___at     51 AGCCAATGAGTCCGCTCAGCTGAATCAAGTAGAAGAAGAGCTAATTGTTG    100

BSNT_05626___    101 TAAAACAAGTATTTCAAAATGAAAAAGCGCTTAATGATGTGTTGAACCAT    150
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU36840___at    101 TAAAACAAGTATTTCAAAATGAAAAAGCGCTTAATGATGTGTTGAACCAT    150

BSNT_05626___    151 CCGAAGATGCCGGCTGCGAAGAAAAAAGAGCTGATCCAAAATGCATTTGG    200
                     ||||||.||||||||||||||||||||||||||||.||||||||||||||
BSU36840___at    151 CCGAAGGTGCCGGCTGCGAAGAAAAAAGAGCTGATTCAAAATGCATTTGG    200

BSNT_05626___    201 CTCTTTGTCACAGTCCGTGCTTAATACGATTTTTCTTTTGATTGACCGCC    250
                     ||||||||||||||||||.||.||||||||||||||||||||||||||||
BSU36840___at    201 CTCTTTGTCACAGTCCGTACTCAATACGATTTTTCTTTTGATTGACCGCC    250

BSNT_05626___    251 ATCGTGCCGCGATTGTGCTTGAGCTCACAGATGAGTTTATCAAACTCGCA    300
                     ||||||||||||||||.|.|||||||||||||||||||||||||||||||
BSU36840___at    251 ATCGTGCCGCGATTGTCCCTGAGCTCACAGATGAGTTTATCAAACTCGCA    300

BSNT_05626___    301 AATGAGGCCCGTCAAACAGAAGACGCAATCGTATATTCAGTGAAACCGCT    350
                     ||||.|||||||||||||||||||||||||||||||||||||||||||||
BSU36840___at    301 AATGTGGCCCGTCAAACAGAAGACGCAATCGTATATTCAGTGAAACCGCT    350

BSNT_05626___    351 GACGGATGCTGAAATGTTACCATTATCACAAGTGTTTGCAAAAAAGGCCG    400
                     |||||||||.|||||||||||||||||||||||||||||||||||.||||
BSU36840___at    351 GACGGATGCAGAAATGTTACCATTATCACAAGTGTTTGCAAAAAAAGCCG    400

BSNT_05626___    401 GAGTCGCTTCACTGAGAATCAGAAATGAAGTGCAGACGGATTTAATAGGC    450
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU36840___at    401 GAGTCGCTTCACTGAGAATCAGAAATGAAGTGCAGACGGATTTAATAGGC    450

BSNT_05626___    451 GGCATTAAAGTCCGCATTGGAAACCGGATTTATGACGGCAGCGTAAGCGG    500
                     ||.|||||||||||||||||||||||||||||||||||||||||||||||
BSU36840___at    451 GGTATTAAAGTCCGCATTGGAAACCGGATTTATGACGGCAGCGTAAGCGG    500

BSNT_05626___    501 GAAGCTTCAGCGCATTGAACGTCAATTAGCCGGGGAAAATCGATAG    546
                     ||||||||||||||||||||||||||||||||||||||||||||||
BSU36840___at    501 GAAGCTTCAGCGCATTGAACGTCAATTAGCCGGGGAAAATCGATAG    546


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