Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

Home About Browser Genes Download Publications

DNA alignment: BSNT_05625 and BSU36830

See Amino acid alignment / Visit BSNT_05625 in genome browser / Return to Orthologue table
########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:26:39
# Commandline: needle
#    -asequence dna-align/BSNT_05625___atpA.1.22522.seq
#    -bsequence dna-align/BSU36830___atpA.2.22522.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_05625___atpA-BSU36830___atpA.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_05625___atpA-BSU36830___atpA.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05625___atpA
# 2: BSU36830___atpA
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1509
# Identity:    1498/1509 (99.3%)
# Similarity:  1498/1509 (99.3%)
# Gaps:           0/1509 ( 0.0%)
# Score: 7446.0
# 
#
#=======================================

BSNT_05625___      1 GTGAGCATCAAAGCTGAAGAGATTAGCACGCTGATAAAACAGCAAATACA     50
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU36830___at      1 GTGAGCATCAAAGCTGAAGAGATTAGCACGCTGATAAAACAGCAAATACA     50

BSNT_05625___     51 AAATTATCAATCTGATATTGAAGTTCAAGACGTAGGTACAGTCATCCAAG    100
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU36830___at     51 AAATTATCAATCTGATATTGAAGTTCAAGACGTAGGTACAGTCATCCAAG    100

BSNT_05625___    101 TCGGTGACGGTATTGCACGTGTGCACGGCCTTGACAACTGTATGGCCGGT    150
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU36830___at    101 TCGGTGACGGTATTGCACGTGTGCACGGCCTTGACAACTGTATGGCCGGT    150

BSNT_05625___    151 GAACTTGTCGAATTTTCAAACGGTGTTTTGGGTATGGCTCAAAACCTTGA    200
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU36830___at    151 GAACTTGTCGAATTTTCAAACGGTGTTTTGGGTATGGCTCAAAACCTTGA    200

BSNT_05625___    201 GGAATCAAACGTAGGTATCGTCATCTTAGGACCTTTCAGTGAGATCCGTG    250
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU36830___at    201 GGAATCAAACGTAGGTATCGTCATCTTAGGACCTTTCAGTGAGATCCGTG    250

BSNT_05625___    251 AGGGAGACGAAGTAAAAAGAACAGGCCGCATCATGGAGGTTCCTGTTGGT    300
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU36830___at    251 AGGGAGACGAAGTAAAAAGAACAGGCCGCATCATGGAGGTTCCTGTTGGT    300

BSNT_05625___    301 GAAGAGTTAATCGGCCGTATTGTAAATCCGTTAGGCCAGCCGGTAGACGG    350
                     ||||||||||||||||||||||||||.|||.|||||||||||||.|||||
BSU36830___at    301 GAAGAGTTAATCGGCCGTATTGTAAACCCGCTAGGCCAGCCGGTTGACGG    350

BSNT_05625___    351 ACTAGGCCCGATTCTGACAAGCAAAACTCGTCCGATCGAAAGCCCTGCAC    400
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU36830___at    351 ACTAGGCCCGATTCTGACAAGCAAAACTCGTCCGATCGAAAGCCCTGCAC    400

BSNT_05625___    401 CAGGCGTTATGGACCGTAAATCAGTTCATGAACCGCTTCAAACCGGTATC    450
                     ||||||||||||||||||||||.|||||||||||||||||||||||||||
BSU36830___at    401 CAGGCGTTATGGACCGTAAATCCGTTCATGAACCGCTTCAAACCGGTATC    450

BSNT_05625___    451 AAAGCGATCGATGCACTGATTCCAATCGGCCGCGGCCAGCGTGAGCTGAT    500
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU36830___at    451 AAAGCGATCGATGCACTGATTCCAATCGGCCGCGGCCAGCGTGAGCTGAT    500

BSNT_05625___    501 CATCGGTGACCGTCAAACAGGTAAAACATCTGTTGCGATCGATGCGATTC    550
                     ||||||||||||||||||||||||||||||||||||||||||||||||.|
BSU36830___at    501 CATCGGTGACCGTCAAACAGGTAAAACATCTGTTGCGATCGATGCGATCC    550

BSNT_05625___    551 TGAACCAAAAAGACCAAGACATGATCTGCGTATATGTTGCGATCGGCCAA    600
                     ||||||||||||||||||||||||||||.|||||||||||||||||||||
BSU36830___at    551 TGAACCAAAAAGACCAAGACATGATCTGTGTATATGTTGCGATCGGCCAA    600

BSNT_05625___    601 AAAGAATCAACAGTCCGCGGCGTAGTAGAAACATTGCGTAAACACGGCGC    650
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU36830___at    601 AAAGAATCAACAGTCCGCGGCGTAGTAGAAACATTGCGTAAACACGGCGC    650

BSNT_05625___    651 GCTTGATTATACAATTGTTGTAACGGCGTCTGCGTCACAGCCGGCACCGC    700
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU36830___at    651 GCTTGATTATACAATTGTTGTAACGGCGTCTGCGTCACAGCCGGCACCGC    700

BSNT_05625___    701 TTCTGTACCTGGCACCGTATGCTGGGGTTACAATGGCAGAAGAATTTATG    750
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU36830___at    701 TTCTGTACCTGGCACCGTATGCTGGGGTTACAATGGCAGAAGAATTTATG    750

BSNT_05625___    751 TACAGCGGCAAGCACGTTCTTGTTGTATACGATGATCTTTCTAAACAAGC    800
                     ||||.|||||||||||||||||||||||||||||||||||||||||||||
BSU36830___at    751 TACAACGGCAAGCACGTTCTTGTTGTATACGATGATCTTTCTAAACAAGC    800

BSNT_05625___    801 TGCCGCTTACCGTGAGCTGTCCTTGCTTCTTCGCCGTCCGCCAGGCCGTG    850
                     .|||||||||||||||||||||||||||||||||||||||||||||||||
BSU36830___at    801 GGCCGCTTACCGTGAGCTGTCCTTGCTTCTTCGCCGTCCGCCAGGCCGTG    850

BSNT_05625___    851 AAGCGTTCCCTGGGGATGTATTCTATCTTCATTCCCGTCTGCTTGAGCGT    900
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU36830___at    851 AAGCGTTCCCTGGGGATGTATTCTATCTTCATTCCCGTCTGCTTGAGCGT    900

BSNT_05625___    901 GCAGCAAAGCTTAGCGACGCGAAAGGCGCAGGATCAATTACAGCTCTGCC    950
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU36830___at    901 GCAGCAAAGCTTAGCGACGCGAAAGGCGCAGGATCAATTACAGCTCTGCC    950

BSNT_05625___    951 GTTCGTAGAAACACAAGCCGGAGATATCTCTGCTTATATTCCGACGAACG   1000
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU36830___at    951 GTTCGTAGAAACACAAGCCGGAGATATCTCTGCTTATATTCCGACGAACG   1000

BSNT_05625___   1001 TCATTTCCATCACCGACGGACAGATCTTCCTGCAATCTGATTTGTTCTTC   1050
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU36830___at   1001 TCATTTCCATCACCGACGGACAGATCTTCCTGCAATCTGATTTGTTCTTC   1050

BSNT_05625___   1051 TCAGGCGTACGTCCAGCGATCAACGCCGGATTGTCTGTATCCCGTGTCGG   1100
                     |||||||||||||||||||||||.||||||||||||||||||||||||||
BSU36830___at   1051 TCAGGCGTACGTCCAGCGATCAATGCCGGATTGTCTGTATCCCGTGTCGG   1100

BSNT_05625___   1101 CGGCTCAGCGCAAATCAAAGCGATGAAAAAAGTATCAGGTACTTTGCGTC   1150
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU36830___at   1101 CGGCTCAGCGCAAATCAAAGCGATGAAAAAAGTATCAGGTACTTTGCGTC   1150

BSNT_05625___   1151 TTGACCTTGCGTCATACCGTGAGCTGGAAGCATTCGCTCAATTCGGTTCT   1200
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU36830___at   1151 TTGACCTTGCGTCATACCGTGAGCTGGAAGCATTCGCTCAATTCGGTTCT   1200

BSNT_05625___   1201 GACCTCGACCAAGCGACTCAGGCAAAACTGAACCGCGGTGCGCGTACAGT   1250
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU36830___at   1201 GACCTCGACCAAGCGACTCAGGCAAAACTGAACCGCGGTGCGCGTACAGT   1250

BSNT_05625___   1251 TGAAGTGCTGAAGCAGGATCTGAACAAGCCGCTTCCGGTTGAAAAGCAAG   1300
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU36830___at   1251 TGAAGTGCTGAAGCAGGATCTGAACAAGCCGCTTCCGGTTGAAAAGCAAG   1300

BSNT_05625___   1301 TAGCCATTCTTTATGCGCTGACAAAAGGATATCTCGATGATATTCCTGTG   1350
                     ||||.|||||||||||||||||||||||||||||||||||||||||||||
BSU36830___at   1301 TAGCTATTCTTTATGCGCTGACAAAAGGATATCTCGATGATATTCCTGTG   1350

BSNT_05625___   1351 GCGGATATCAGACGTTTTGAAGAAGAGTACTACATGTACCTTGACCAAAA   1400
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU36830___at   1351 GCGGATATCAGACGTTTTGAAGAAGAGTACTACATGTACCTTGACCAAAA   1400

BSNT_05625___   1401 CCATAAAGACCTGCTTGACGGAATTGCGAAAACAGGAAACCTTCCTGCTG   1450
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU36830___at   1401 CCATAAAGACCTGCTTGACGGAATTGCGAAAACAGGAAACCTTCCTGCTG   1450

BSNT_05625___   1451 ATGAAGACTTCAATGCTGCAATCGAAGGCTTCAAACGCACATTTGCACCA   1500
                     |||||||||||||.||||||||||||||||||||||||||||||||||||
BSU36830___at   1451 ATGAAGACTTCAAAGCTGCAATCGAAGGCTTCAAACGCACATTTGCACCA   1500

BSNT_05625___   1501 AGCAACTAA   1509
                     |||||||||
BSU36830___at   1501 AGCAACTAA   1509


#---------------------------------------
#---------------------------------------
Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.