Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_05625 and BSU36830
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:26:39
# Commandline: needle
# -asequence dna-align/BSNT_05625___atpA.1.22522.seq
# -bsequence dna-align/BSU36830___atpA.2.22522.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_05625___atpA-BSU36830___atpA.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_05625___atpA-BSU36830___atpA.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05625___atpA
# 2: BSU36830___atpA
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1509
# Identity: 1498/1509 (99.3%)
# Similarity: 1498/1509 (99.3%)
# Gaps: 0/1509 ( 0.0%)
# Score: 7446.0
#
#
#=======================================
BSNT_05625___ 1 GTGAGCATCAAAGCTGAAGAGATTAGCACGCTGATAAAACAGCAAATACA 50
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU36830___at 1 GTGAGCATCAAAGCTGAAGAGATTAGCACGCTGATAAAACAGCAAATACA 50
BSNT_05625___ 51 AAATTATCAATCTGATATTGAAGTTCAAGACGTAGGTACAGTCATCCAAG 100
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU36830___at 51 AAATTATCAATCTGATATTGAAGTTCAAGACGTAGGTACAGTCATCCAAG 100
BSNT_05625___ 101 TCGGTGACGGTATTGCACGTGTGCACGGCCTTGACAACTGTATGGCCGGT 150
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU36830___at 101 TCGGTGACGGTATTGCACGTGTGCACGGCCTTGACAACTGTATGGCCGGT 150
BSNT_05625___ 151 GAACTTGTCGAATTTTCAAACGGTGTTTTGGGTATGGCTCAAAACCTTGA 200
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU36830___at 151 GAACTTGTCGAATTTTCAAACGGTGTTTTGGGTATGGCTCAAAACCTTGA 200
BSNT_05625___ 201 GGAATCAAACGTAGGTATCGTCATCTTAGGACCTTTCAGTGAGATCCGTG 250
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU36830___at 201 GGAATCAAACGTAGGTATCGTCATCTTAGGACCTTTCAGTGAGATCCGTG 250
BSNT_05625___ 251 AGGGAGACGAAGTAAAAAGAACAGGCCGCATCATGGAGGTTCCTGTTGGT 300
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU36830___at 251 AGGGAGACGAAGTAAAAAGAACAGGCCGCATCATGGAGGTTCCTGTTGGT 300
BSNT_05625___ 301 GAAGAGTTAATCGGCCGTATTGTAAATCCGTTAGGCCAGCCGGTAGACGG 350
||||||||||||||||||||||||||.|||.|||||||||||||.|||||
BSU36830___at 301 GAAGAGTTAATCGGCCGTATTGTAAACCCGCTAGGCCAGCCGGTTGACGG 350
BSNT_05625___ 351 ACTAGGCCCGATTCTGACAAGCAAAACTCGTCCGATCGAAAGCCCTGCAC 400
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU36830___at 351 ACTAGGCCCGATTCTGACAAGCAAAACTCGTCCGATCGAAAGCCCTGCAC 400
BSNT_05625___ 401 CAGGCGTTATGGACCGTAAATCAGTTCATGAACCGCTTCAAACCGGTATC 450
||||||||||||||||||||||.|||||||||||||||||||||||||||
BSU36830___at 401 CAGGCGTTATGGACCGTAAATCCGTTCATGAACCGCTTCAAACCGGTATC 450
BSNT_05625___ 451 AAAGCGATCGATGCACTGATTCCAATCGGCCGCGGCCAGCGTGAGCTGAT 500
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU36830___at 451 AAAGCGATCGATGCACTGATTCCAATCGGCCGCGGCCAGCGTGAGCTGAT 500
BSNT_05625___ 501 CATCGGTGACCGTCAAACAGGTAAAACATCTGTTGCGATCGATGCGATTC 550
||||||||||||||||||||||||||||||||||||||||||||||||.|
BSU36830___at 501 CATCGGTGACCGTCAAACAGGTAAAACATCTGTTGCGATCGATGCGATCC 550
BSNT_05625___ 551 TGAACCAAAAAGACCAAGACATGATCTGCGTATATGTTGCGATCGGCCAA 600
||||||||||||||||||||||||||||.|||||||||||||||||||||
BSU36830___at 551 TGAACCAAAAAGACCAAGACATGATCTGTGTATATGTTGCGATCGGCCAA 600
BSNT_05625___ 601 AAAGAATCAACAGTCCGCGGCGTAGTAGAAACATTGCGTAAACACGGCGC 650
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU36830___at 601 AAAGAATCAACAGTCCGCGGCGTAGTAGAAACATTGCGTAAACACGGCGC 650
BSNT_05625___ 651 GCTTGATTATACAATTGTTGTAACGGCGTCTGCGTCACAGCCGGCACCGC 700
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU36830___at 651 GCTTGATTATACAATTGTTGTAACGGCGTCTGCGTCACAGCCGGCACCGC 700
BSNT_05625___ 701 TTCTGTACCTGGCACCGTATGCTGGGGTTACAATGGCAGAAGAATTTATG 750
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU36830___at 701 TTCTGTACCTGGCACCGTATGCTGGGGTTACAATGGCAGAAGAATTTATG 750
BSNT_05625___ 751 TACAGCGGCAAGCACGTTCTTGTTGTATACGATGATCTTTCTAAACAAGC 800
||||.|||||||||||||||||||||||||||||||||||||||||||||
BSU36830___at 751 TACAACGGCAAGCACGTTCTTGTTGTATACGATGATCTTTCTAAACAAGC 800
BSNT_05625___ 801 TGCCGCTTACCGTGAGCTGTCCTTGCTTCTTCGCCGTCCGCCAGGCCGTG 850
.|||||||||||||||||||||||||||||||||||||||||||||||||
BSU36830___at 801 GGCCGCTTACCGTGAGCTGTCCTTGCTTCTTCGCCGTCCGCCAGGCCGTG 850
BSNT_05625___ 851 AAGCGTTCCCTGGGGATGTATTCTATCTTCATTCCCGTCTGCTTGAGCGT 900
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU36830___at 851 AAGCGTTCCCTGGGGATGTATTCTATCTTCATTCCCGTCTGCTTGAGCGT 900
BSNT_05625___ 901 GCAGCAAAGCTTAGCGACGCGAAAGGCGCAGGATCAATTACAGCTCTGCC 950
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU36830___at 901 GCAGCAAAGCTTAGCGACGCGAAAGGCGCAGGATCAATTACAGCTCTGCC 950
BSNT_05625___ 951 GTTCGTAGAAACACAAGCCGGAGATATCTCTGCTTATATTCCGACGAACG 1000
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU36830___at 951 GTTCGTAGAAACACAAGCCGGAGATATCTCTGCTTATATTCCGACGAACG 1000
BSNT_05625___ 1001 TCATTTCCATCACCGACGGACAGATCTTCCTGCAATCTGATTTGTTCTTC 1050
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU36830___at 1001 TCATTTCCATCACCGACGGACAGATCTTCCTGCAATCTGATTTGTTCTTC 1050
BSNT_05625___ 1051 TCAGGCGTACGTCCAGCGATCAACGCCGGATTGTCTGTATCCCGTGTCGG 1100
|||||||||||||||||||||||.||||||||||||||||||||||||||
BSU36830___at 1051 TCAGGCGTACGTCCAGCGATCAATGCCGGATTGTCTGTATCCCGTGTCGG 1100
BSNT_05625___ 1101 CGGCTCAGCGCAAATCAAAGCGATGAAAAAAGTATCAGGTACTTTGCGTC 1150
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU36830___at 1101 CGGCTCAGCGCAAATCAAAGCGATGAAAAAAGTATCAGGTACTTTGCGTC 1150
BSNT_05625___ 1151 TTGACCTTGCGTCATACCGTGAGCTGGAAGCATTCGCTCAATTCGGTTCT 1200
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU36830___at 1151 TTGACCTTGCGTCATACCGTGAGCTGGAAGCATTCGCTCAATTCGGTTCT 1200
BSNT_05625___ 1201 GACCTCGACCAAGCGACTCAGGCAAAACTGAACCGCGGTGCGCGTACAGT 1250
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU36830___at 1201 GACCTCGACCAAGCGACTCAGGCAAAACTGAACCGCGGTGCGCGTACAGT 1250
BSNT_05625___ 1251 TGAAGTGCTGAAGCAGGATCTGAACAAGCCGCTTCCGGTTGAAAAGCAAG 1300
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU36830___at 1251 TGAAGTGCTGAAGCAGGATCTGAACAAGCCGCTTCCGGTTGAAAAGCAAG 1300
BSNT_05625___ 1301 TAGCCATTCTTTATGCGCTGACAAAAGGATATCTCGATGATATTCCTGTG 1350
||||.|||||||||||||||||||||||||||||||||||||||||||||
BSU36830___at 1301 TAGCTATTCTTTATGCGCTGACAAAAGGATATCTCGATGATATTCCTGTG 1350
BSNT_05625___ 1351 GCGGATATCAGACGTTTTGAAGAAGAGTACTACATGTACCTTGACCAAAA 1400
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU36830___at 1351 GCGGATATCAGACGTTTTGAAGAAGAGTACTACATGTACCTTGACCAAAA 1400
BSNT_05625___ 1401 CCATAAAGACCTGCTTGACGGAATTGCGAAAACAGGAAACCTTCCTGCTG 1450
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU36830___at 1401 CCATAAAGACCTGCTTGACGGAATTGCGAAAACAGGAAACCTTCCTGCTG 1450
BSNT_05625___ 1451 ATGAAGACTTCAATGCTGCAATCGAAGGCTTCAAACGCACATTTGCACCA 1500
|||||||||||||.||||||||||||||||||||||||||||||||||||
BSU36830___at 1451 ATGAAGACTTCAAAGCTGCAATCGAAGGCTTCAAACGCACATTTGCACCA 1500
BSNT_05625___ 1501 AGCAACTAA 1509
|||||||||
BSU36830___at 1501 AGCAACTAA 1509
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