Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_05623 and BSU36820

See Amino acid alignment / Visit BSNT_05623 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:26:39
# Commandline: needle
#    -asequence dna-align/BSNT_05623___atpG.1.22522.seq
#    -bsequence dna-align/BSU36820___atpG.2.22522.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_05623___atpG-BSU36820___atpG.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_05623___atpG-BSU36820___atpG.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05623___atpG
# 2: BSU36820___atpG
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 864
# Identity:     857/864 (99.2%)
# Similarity:   857/864 (99.2%)
# Gaps:           0/864 ( 0.0%)
# Score: 4257.0
# 
#
#=======================================

BSNT_05623___      1 TTGGCCTCATTACGCGATATTAAGTCAAGGATCACGTCAACGAAAAAAAC     50
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU36820___at      1 TTGGCCTCATTACGCGATATTAAGTCAAGGATCACGTCAACGAAAAAAAC     50

BSNT_05623___     51 AAGTCAGATTACAAAAGCCATGCAGATGGTATCTGCGGCTAAGCTGAATC    100
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU36820___at     51 AAGTCAGATTACAAAAGCCATGCAGATGGTATCTGCGGCTAAGCTGAATC    100

BSNT_05623___    101 GTGCTGAAAACAATGCAAAATCATTTGTGCCATATATGGATAAAATCCAA    150
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU36820___at    101 GTGCTGAAAACAATGCAAAATCATTTGTGCCATATATGGATAAAATCCAA    150

BSNT_05623___    151 GAGGTTGTGTCAAACGTCGGAAGAGTTTCCGGCAACGTAAAGCATCCGAT    200
                     ||||||||||||||||||||||||||||||||||||||.|||||.|||||
BSU36820___at    151 GAGGTTGTGTCAAACGTCGGAAGAGTTTCCGGCAACGTGAAGCACCCGAT    200

BSNT_05623___    201 GCTTCTCAGCAGAGAAGTGAAAAAAACGGCATACCTTGTCATTACGTCTG    250
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU36820___at    201 GCTTCTCAGCAGAGAAGTGAAAAAAACGGCATACCTTGTCATTACGTCTG    250

BSNT_05623___    251 ACCGCGGTCTTGCCGGCGCTTTTAACAGTTCGGTTTTACGGAATGCTTAT    300
                     ||||||||||||||||||||||||||||||||||||||||||.|||||||
BSU36820___at    251 ACCGCGGTCTTGCCGGCGCTTTTAACAGTTCGGTTTTACGGAGTGCTTAT    300

BSNT_05623___    301 CAGGCCATGCAAGAACGTCATCAGTCTAAGGATGAGTATGCGGTGATTGC    350
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU36820___at    301 CAGGCCATGCAAGAACGTCATCAGTCTAAGGATGAGTATGCGGTGATTGC    350

BSNT_05623___    351 CATCGGAAGAGTGGGCCGTGATTTCTTTAAGAAACGGGAGATTCCGATCA    400
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU36820___at    351 CATCGGAAGAGTGGGCCGTGATTTCTTTAAGAAACGGGAGATTCCGATCA    400

BSNT_05623___    401 TTTCCGAGTTAACAGGACTTGGGGATGAAGTGACGTTTACAGAAATTAAA    450
                     ||||||||||||||||||||||.||||||||.||||||||||||||||||
BSU36820___at    401 TTTCCGAGTTAACAGGACTTGGAGATGAAGTAACGTTTACAGAAATTAAA    450

BSNT_05623___    451 GATCTTGCCCGTCAAACGATCCAAATGTTTATAGACGGTGCGTTTGATGA    500
                     ||||||||||||||||||||.|||||||||||||||||||||||||||||
BSU36820___at    451 GATCTTGCCCGTCAAACGATTCAAATGTTTATAGACGGTGCGTTTGATGA    500

BSNT_05623___    501 ATTGCACCTTGTTTATAACCATTTTGTCAGCGCCATTACTCAAGAAGTAA    550
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU36820___at    501 ATTGCACCTTGTTTATAACCATTTTGTCAGCGCCATTACTCAAGAAGTAA    550

BSNT_05623___    551 CGGAGAAAAAACTTCTGCCGTTATCTGATTTGGGCAGCGGCGGCGGAAAA    600
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU36820___at    551 CGGAGAAAAAACTTCTGCCGTTATCTGATTTGGGCAGCGGCGGCGGAAAA    600

BSNT_05623___    601 AGAACGGCGTCTTATGAATTTGAACCATCTGAAGAGGAGGTTCTGGAGGT    650
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU36820___at    601 AGAACGGCGTCTTATGAATTTGAACCATCTGAAGAGGAGGTTCTGGAGGT    650

BSNT_05623___    651 TTTGCTTCCTCAATATGCAGAAAGCTTAATCTTCGGTGCGCTTCTTGACA    700
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU36820___at    651 TTTGCTTCCTCAATATGCAGAAAGCTTAATCTTCGGTGCGCTTCTTGACA    700

BSNT_05623___    701 GTAAAGCAAGTGAGCACGCTGCAAGAATGACGGCGATGAAAAATGCGACA    750
                     |||||||||||||||||||||||||||||||||||||||||||.||||||
BSU36820___at    701 GTAAAGCAAGTGAGCACGCTGCAAGAATGACGGCGATGAAAAACGCGACA    750

BSNT_05623___    751 GACAACGCGAAGGAACTTATCGATTCACTTTCGCTTTCTTACAACCGCGC    800
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU36820___at    751 GACAACGCGAAGGAACTTATCGATTCACTTTCGCTTTCTTACAACCGCGC    800

BSNT_05623___    801 TCGCCAAGCAGCCATCACACAAGAAATTACGGAAATTGTCGGCGGAGCAG    850
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU36820___at    801 TCGCCAAGCAGCCATCACACAAGAAATTACGGAAATTGTCGGCGGAGCAG    850

BSNT_05623___    851 CCGCTTTAGAATAG    864
                     ||||||||||||||
BSU36820___at    851 CCGCTTTAGAATAG    864


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