Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_05622 and BSU36810
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:26:39
# Commandline: needle
# -asequence dna-align/BSNT_05622___atpD.1.22522.seq
# -bsequence dna-align/BSU36810___atpD.2.22522.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_05622___atpD-BSU36810___atpD.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_05622___atpD-BSU36810___atpD.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05622___atpD
# 2: BSU36810___atpD
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1422
# Identity: 1414/1422 (99.4%)
# Similarity: 1414/1422 (99.4%)
# Gaps: 0/1422 ( 0.0%)
# Score: 7038.0
#
#
#=======================================
BSNT_05622___ 1 ATGAAGAAAGGACGCGTTAGCCAGGTATTAGGACCGGTCGTCGACGTGCG 50
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU36810___at 1 ATGAAGAAAGGACGCGTTAGCCAGGTATTAGGACCGGTCGTCGACGTGCG 50
BSNT_05622___ 51 TTTTGAAGACGGTCACTTGCCTGAAATTTATAATGCGATTAAAATTTCAC 100
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU36810___at 51 TTTTGAAGACGGTCACTTGCCTGAAATTTATAATGCGATTAAAATTTCAC 100
BSNT_05622___ 101 AGCCAGCTGCAAGTGAAAACGAAGTAGGTATTGATTTAACGCTTGAGGTC 150
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU36810___at 101 AGCCAGCTGCAAGTGAAAACGAAGTAGGTATTGATTTAACGCTTGAGGTC 150
BSNT_05622___ 151 GCTCTTCATTTAGGTGATGATACAGTCCGTACAATCGCAATGGCATCTAC 200
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU36810___at 151 GCTCTTCATTTAGGTGATGATACAGTCCGTACAATCGCAATGGCATCTAC 200
BSNT_05622___ 201 GGATGGTGTTCAGCGCGGTATGGAAGCTGTAGATACAGGAGCGCCAATCT 250
.|||||||||||||||||||||||||||||||||||||||||||||||||
BSU36810___at 201 AGATGGTGTTCAGCGCGGTATGGAAGCTGTAGATACAGGAGCGCCAATCT 250
BSNT_05622___ 251 CAGTACCGGTTGGTGATGTAACACTTGGACGTGTATTTAACGTTCTCGGA 300
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU36810___at 251 CAGTACCGGTTGGTGATGTAACACTTGGACGTGTATTTAACGTTCTCGGA 300
BSNT_05622___ 301 GAAAATATTGATTTGAATGAGCCGGTTCCTGCGGATGCGAAAAAGGATCC 350
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU36810___at 301 GAAAATATTGATTTGAATGAGCCGGTTCCTGCGGATGCGAAAAAGGATCC 350
BSNT_05622___ 351 GATTCACAGACAGGCGCCTTCATTCGATCAGCTTTCAACAGAAGTTGAAA 400
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU36810___at 351 GATTCACAGACAGGCGCCTTCATTCGATCAGCTTTCAACAGAAGTTGAAA 400
BSNT_05622___ 401 TTCTTGAAACAGGTATTAAAGTTGTTGATTTGCTTGCTCCTTACATTAAG 450
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU36810___at 401 TTCTTGAAACAGGTATTAAAGTTGTTGATTTGCTTGCTCCTTACATTAAG 450
BSNT_05622___ 451 GGCGGTAAAATCGGATTGTTCGGTGGTGCCGGTGTAGGTAAAACCGTATT 500
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU36810___at 451 GGCGGTAAAATCGGATTGTTCGGTGGTGCCGGTGTAGGTAAAACCGTATT 500
BSNT_05622___ 501 AATCCAGGAATTAATCAACAACATCGCGCAAGAGCACGGCGGTATCTCTG 550
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU36810___at 501 AATCCAGGAATTAATCAACAACATCGCGCAAGAGCACGGCGGTATCTCTG 550
BSNT_05622___ 551 TATTCGCCGGCGTAGGAGAGCGTACTCGTGAAGGGAACGACCTTTTCTAC 600
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU36810___at 551 TATTCGCCGGCGTAGGAGAGCGTACTCGTGAAGGGAACGACCTTTTCTAC 600
BSNT_05622___ 601 GAAATGAGTGACTCTGGCGTAATCAACAAAACAGCCATGGTATTCGGACA 650
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU36810___at 601 GAAATGAGTGACTCTGGCGTAATCAACAAAACAGCCATGGTATTCGGACA 650
BSNT_05622___ 651 AATGAACGAGCCGCCGGGCGCACGTATGCGTGTTGCTTTGACAGGCCTTA 700
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU36810___at 651 AATGAACGAGCCGCCGGGCGCACGTATGCGTGTTGCTTTGACAGGCCTTA 700
BSNT_05622___ 701 CAATGGCTGAGCACTTCCGTGATGTACAAGGACAGGACGTACTGTTCTTC 750
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU36810___at 701 CAATGGCTGAGCACTTCCGTGATGTACAAGGACAGGACGTACTGTTCTTC 750
BSNT_05622___ 751 ATCGATAACATTTTCCGTTTCACACAAGCGGGTTCAGAGGTTTCAGCCCT 800
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU36810___at 751 ATCGATAACATTTTCCGTTTCACACAAGCGGGTTCAGAGGTTTCAGCCCT 800
BSNT_05622___ 801 TCTTGGCCGTATGCCTTCAGCGGTTGGTTATCAGCCGACGCTTGCAACTG 850
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU36810___at 801 TCTTGGCCGTATGCCTTCAGCGGTTGGTTATCAGCCGACGCTTGCAACTG 850
BSNT_05622___ 851 AGATGGGTCAGCTCCAAGAGCGTATCACGTCTACGAACGTTGGATCAGTT 900
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU36810___at 851 AGATGGGTCAGCTCCAAGAGCGTATCACGTCTACGAACGTTGGATCAGTT 900
BSNT_05622___ 901 ACATCTATCCAGGCGATCTACGTGCCTGCCGATGACTACACTGACCCGGC 950
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU36810___at 901 ACATCTATCCAGGCGATCTACGTGCCTGCCGATGACTACACTGACCCGGC 950
BSNT_05622___ 951 GCCGGCGACAACGTTCGCTCACTTGGATGCGACAACAAACCTTGAGCGTA 1000
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU36810___at 951 GCCGGCGACAACGTTCGCTCACTTGGATGCGACAACAAACCTTGAGCGTA 1000
BSNT_05622___ 1001 AATTAACTGAAATGGGTATTTACCCTGCGGTTGATCCGTTGGCATCTACA 1050
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU36810___at 1001 AATTAACTGAAATGGGTATTTACCCTGCGGTTGATCCGTTGGCATCTACA 1050
BSNT_05622___ 1051 TCACGCGCCCTTGCTCCTGAAATTGTCGGAGAAGAGCATTATGCGGTTGC 1100
||||||||||||||||||||||||||.|||||||||||.|||||||||||
BSU36810___at 1051 TCACGCGCCCTTGCTCCTGAAATTGTTGGAGAAGAGCACTATGCGGTTGC 1100
BSNT_05622___ 1101 GCGTGAAGTACAGTCAACGCTTCAGCGTTACAAAGAGCTTCAAGATATCA 1150
||||||||||||||||||||||||||||||||||||||||||.|||||||
BSU36810___at 1101 GCGTGAAGTACAGTCAACGCTTCAGCGTTACAAAGAGCTTCAGGATATCA 1150
BSNT_05622___ 1151 TTGCGATTCTCGGTATGGATGAACTAGGCGAGGAAGACAAACTTGTCGTT 1200
|||||||||||||||||||||||.||||||||||||||||||||||||||
BSU36810___at 1151 TTGCGATTCTCGGTATGGATGAATTAGGCGAGGAAGACAAACTTGTCGTT 1200
BSNT_05622___ 1201 CACCGCGCACGCCGTATCCAGTTCTTCCTTTCTCAGAACTTCCACGTGGC 1250
|||||||||||.||||||||||||||||||||||||||||||||||||||
BSU36810___at 1201 CACCGCGCACGTCGTATCCAGTTCTTCCTTTCTCAGAACTTCCACGTGGC 1250
BSNT_05622___ 1251 TGAACAGTTCACTGGACAAAAAGGTTCTTACGTGCCTGTAAAAGAGACGG 1300
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU36810___at 1251 TGAACAGTTCACTGGACAAAAAGGTTCTTACGTGCCTGTAAAAGAGACGG 1300
BSNT_05622___ 1301 TACAAGGCTTCAAAGAAATCTTAGCCGGTAAATACGACCATCTTCCAGAA 1350
||||||||||||||||||||||||||||||||||.|||||||||||||||
BSU36810___at 1301 TACAAGGCTTCAAAGAAATCTTAGCCGGTAAATATGACCATCTTCCAGAA 1350
BSNT_05622___ 1351 GATGCGTTCCGTCTTGTAGGCCGTATCGAAGAAGTTGTTGAGAAAGCAAA 1400
|||||.||||||||||||||||||||||||||||||||||||||||||||
BSU36810___at 1351 GATGCATTCCGTCTTGTAGGCCGTATCGAAGAAGTTGTTGAGAAAGCAAA 1400
BSNT_05622___ 1401 AGAAATGGGTGTAGAAGTTTAA 1422
||||||||||||||||||||||
BSU36810___at 1401 AGAAATGGGTGTAGAAGTTTAA 1422
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