Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_05622 and BSU36810

See Amino acid alignment / Visit BSNT_05622 in genome browser / Return to Orthologue table
########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:26:39
# Commandline: needle
#    -asequence dna-align/BSNT_05622___atpD.1.22522.seq
#    -bsequence dna-align/BSU36810___atpD.2.22522.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_05622___atpD-BSU36810___atpD.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_05622___atpD-BSU36810___atpD.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05622___atpD
# 2: BSU36810___atpD
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1422
# Identity:    1414/1422 (99.4%)
# Similarity:  1414/1422 (99.4%)
# Gaps:           0/1422 ( 0.0%)
# Score: 7038.0
# 
#
#=======================================

BSNT_05622___      1 ATGAAGAAAGGACGCGTTAGCCAGGTATTAGGACCGGTCGTCGACGTGCG     50
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU36810___at      1 ATGAAGAAAGGACGCGTTAGCCAGGTATTAGGACCGGTCGTCGACGTGCG     50

BSNT_05622___     51 TTTTGAAGACGGTCACTTGCCTGAAATTTATAATGCGATTAAAATTTCAC    100
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU36810___at     51 TTTTGAAGACGGTCACTTGCCTGAAATTTATAATGCGATTAAAATTTCAC    100

BSNT_05622___    101 AGCCAGCTGCAAGTGAAAACGAAGTAGGTATTGATTTAACGCTTGAGGTC    150
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU36810___at    101 AGCCAGCTGCAAGTGAAAACGAAGTAGGTATTGATTTAACGCTTGAGGTC    150

BSNT_05622___    151 GCTCTTCATTTAGGTGATGATACAGTCCGTACAATCGCAATGGCATCTAC    200
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU36810___at    151 GCTCTTCATTTAGGTGATGATACAGTCCGTACAATCGCAATGGCATCTAC    200

BSNT_05622___    201 GGATGGTGTTCAGCGCGGTATGGAAGCTGTAGATACAGGAGCGCCAATCT    250
                     .|||||||||||||||||||||||||||||||||||||||||||||||||
BSU36810___at    201 AGATGGTGTTCAGCGCGGTATGGAAGCTGTAGATACAGGAGCGCCAATCT    250

BSNT_05622___    251 CAGTACCGGTTGGTGATGTAACACTTGGACGTGTATTTAACGTTCTCGGA    300
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU36810___at    251 CAGTACCGGTTGGTGATGTAACACTTGGACGTGTATTTAACGTTCTCGGA    300

BSNT_05622___    301 GAAAATATTGATTTGAATGAGCCGGTTCCTGCGGATGCGAAAAAGGATCC    350
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU36810___at    301 GAAAATATTGATTTGAATGAGCCGGTTCCTGCGGATGCGAAAAAGGATCC    350

BSNT_05622___    351 GATTCACAGACAGGCGCCTTCATTCGATCAGCTTTCAACAGAAGTTGAAA    400
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU36810___at    351 GATTCACAGACAGGCGCCTTCATTCGATCAGCTTTCAACAGAAGTTGAAA    400

BSNT_05622___    401 TTCTTGAAACAGGTATTAAAGTTGTTGATTTGCTTGCTCCTTACATTAAG    450
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU36810___at    401 TTCTTGAAACAGGTATTAAAGTTGTTGATTTGCTTGCTCCTTACATTAAG    450

BSNT_05622___    451 GGCGGTAAAATCGGATTGTTCGGTGGTGCCGGTGTAGGTAAAACCGTATT    500
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU36810___at    451 GGCGGTAAAATCGGATTGTTCGGTGGTGCCGGTGTAGGTAAAACCGTATT    500

BSNT_05622___    501 AATCCAGGAATTAATCAACAACATCGCGCAAGAGCACGGCGGTATCTCTG    550
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU36810___at    501 AATCCAGGAATTAATCAACAACATCGCGCAAGAGCACGGCGGTATCTCTG    550

BSNT_05622___    551 TATTCGCCGGCGTAGGAGAGCGTACTCGTGAAGGGAACGACCTTTTCTAC    600
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU36810___at    551 TATTCGCCGGCGTAGGAGAGCGTACTCGTGAAGGGAACGACCTTTTCTAC    600

BSNT_05622___    601 GAAATGAGTGACTCTGGCGTAATCAACAAAACAGCCATGGTATTCGGACA    650
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU36810___at    601 GAAATGAGTGACTCTGGCGTAATCAACAAAACAGCCATGGTATTCGGACA    650

BSNT_05622___    651 AATGAACGAGCCGCCGGGCGCACGTATGCGTGTTGCTTTGACAGGCCTTA    700
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU36810___at    651 AATGAACGAGCCGCCGGGCGCACGTATGCGTGTTGCTTTGACAGGCCTTA    700

BSNT_05622___    701 CAATGGCTGAGCACTTCCGTGATGTACAAGGACAGGACGTACTGTTCTTC    750
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU36810___at    701 CAATGGCTGAGCACTTCCGTGATGTACAAGGACAGGACGTACTGTTCTTC    750

BSNT_05622___    751 ATCGATAACATTTTCCGTTTCACACAAGCGGGTTCAGAGGTTTCAGCCCT    800
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU36810___at    751 ATCGATAACATTTTCCGTTTCACACAAGCGGGTTCAGAGGTTTCAGCCCT    800

BSNT_05622___    801 TCTTGGCCGTATGCCTTCAGCGGTTGGTTATCAGCCGACGCTTGCAACTG    850
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU36810___at    801 TCTTGGCCGTATGCCTTCAGCGGTTGGTTATCAGCCGACGCTTGCAACTG    850

BSNT_05622___    851 AGATGGGTCAGCTCCAAGAGCGTATCACGTCTACGAACGTTGGATCAGTT    900
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU36810___at    851 AGATGGGTCAGCTCCAAGAGCGTATCACGTCTACGAACGTTGGATCAGTT    900

BSNT_05622___    901 ACATCTATCCAGGCGATCTACGTGCCTGCCGATGACTACACTGACCCGGC    950
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU36810___at    901 ACATCTATCCAGGCGATCTACGTGCCTGCCGATGACTACACTGACCCGGC    950

BSNT_05622___    951 GCCGGCGACAACGTTCGCTCACTTGGATGCGACAACAAACCTTGAGCGTA   1000
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU36810___at    951 GCCGGCGACAACGTTCGCTCACTTGGATGCGACAACAAACCTTGAGCGTA   1000

BSNT_05622___   1001 AATTAACTGAAATGGGTATTTACCCTGCGGTTGATCCGTTGGCATCTACA   1050
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU36810___at   1001 AATTAACTGAAATGGGTATTTACCCTGCGGTTGATCCGTTGGCATCTACA   1050

BSNT_05622___   1051 TCACGCGCCCTTGCTCCTGAAATTGTCGGAGAAGAGCATTATGCGGTTGC   1100
                     ||||||||||||||||||||||||||.|||||||||||.|||||||||||
BSU36810___at   1051 TCACGCGCCCTTGCTCCTGAAATTGTTGGAGAAGAGCACTATGCGGTTGC   1100

BSNT_05622___   1101 GCGTGAAGTACAGTCAACGCTTCAGCGTTACAAAGAGCTTCAAGATATCA   1150
                     ||||||||||||||||||||||||||||||||||||||||||.|||||||
BSU36810___at   1101 GCGTGAAGTACAGTCAACGCTTCAGCGTTACAAAGAGCTTCAGGATATCA   1150

BSNT_05622___   1151 TTGCGATTCTCGGTATGGATGAACTAGGCGAGGAAGACAAACTTGTCGTT   1200
                     |||||||||||||||||||||||.||||||||||||||||||||||||||
BSU36810___at   1151 TTGCGATTCTCGGTATGGATGAATTAGGCGAGGAAGACAAACTTGTCGTT   1200

BSNT_05622___   1201 CACCGCGCACGCCGTATCCAGTTCTTCCTTTCTCAGAACTTCCACGTGGC   1250
                     |||||||||||.||||||||||||||||||||||||||||||||||||||
BSU36810___at   1201 CACCGCGCACGTCGTATCCAGTTCTTCCTTTCTCAGAACTTCCACGTGGC   1250

BSNT_05622___   1251 TGAACAGTTCACTGGACAAAAAGGTTCTTACGTGCCTGTAAAAGAGACGG   1300
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU36810___at   1251 TGAACAGTTCACTGGACAAAAAGGTTCTTACGTGCCTGTAAAAGAGACGG   1300

BSNT_05622___   1301 TACAAGGCTTCAAAGAAATCTTAGCCGGTAAATACGACCATCTTCCAGAA   1350
                     ||||||||||||||||||||||||||||||||||.|||||||||||||||
BSU36810___at   1301 TACAAGGCTTCAAAGAAATCTTAGCCGGTAAATATGACCATCTTCCAGAA   1350

BSNT_05622___   1351 GATGCGTTCCGTCTTGTAGGCCGTATCGAAGAAGTTGTTGAGAAAGCAAA   1400
                     |||||.||||||||||||||||||||||||||||||||||||||||||||
BSU36810___at   1351 GATGCATTCCGTCTTGTAGGCCGTATCGAAGAAGTTGTTGAGAAAGCAAA   1400

BSNT_05622___   1401 AGAAATGGGTGTAGAAGTTTAA   1422
                     ||||||||||||||||||||||
BSU36810___at   1401 AGAAATGGGTGTAGAAGTTTAA   1422


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