Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_05619 and BSU36790
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:26:38
# Commandline: needle
# -asequence dna-align/BSNT_05619___ywmA.1.22522.seq
# -bsequence dna-align/BSU36790___ywmA.2.22522.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_05619___ywmA-BSU36790___ywmA.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_05619___ywmA-BSU36790___ywmA.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05619___ywmA
# 2: BSU36790___ywmA
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 508
# Identity: 468/508 (92.1%)
# Similarity: 468/508 (92.1%)
# Gaps: 35/508 ( 6.9%)
# Score: 2300.0
#
#
#=======================================
BSNT_05619___ 1 ATGGTATACTTTATTGGAAAGGAGCTGGCAAATGTGAATCATTCTTTTTT 50
|||||||||||||||||
BSU36790___yw 1 ---------------------------------GTGAATCATTCTTTTTT 17
BSNT_05619___ 51 TCAGCCTGAAAAGCAATATGGTGAGGACCTGCCAATTTTTGATCAGGAAT 100
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU36790___yw 18 TCAGCCTGAAAAGCAATATGGTGAGGACCTGCCAATTTTTGATCAGGAAT 67
BSNT_05619___ 101 GGGAAGCAATTGCATTCTATTATGATTATAGACAGTCACAGATTGAAGAA 150
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU36790___yw 68 GGGAAGCAATTGCATTCTATTATGATTATAGACAGTCACAGATTGAAGAA 117
BSNT_05619___ 151 CTGAATGAATTGTGTCAGTTTTTTAACATTTCTCTTACCTATACGAGAGA 200
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU36790___yw 118 CTGAATGAATTGTGTCAGTTTTTTAACATTTCTCTTACCTATACGAGAGA 167
BSNT_05619___ 201 AAGCCTTGAAGAGCTTGAAAACCTTTATTTTCAAAGTATACAAGAGCTTT 250
||||||||||||||||||||||||.||||||||||||||||||||.||||
BSU36790___yw 168 AAGCCTTGAAGAGCTTGAAAACCTCTATTTTCAAAGTATACAAGAACTTT 217
BSNT_05619___ 251 TGCTTGCTGATTGGAATCTTCCTATTGAAGAATTCGAGAAAATGATCAGT 300
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU36790___yw 218 TGCTTGCTGATTGGAATCTTCCTATTGAAGAATTCGAGAAAATGATCAGT 267
BSNT_05619___ 301 GTTTATCTTATAGATTGCGTGATTGCCCGCCATGAAGATGCTGAATGGGT 350
|||||||||||||||||.||||||||||||||||||||||||||||||||
BSU36790___yw 268 GTTTATCTTATAGATTGTGTGATTGCCCGCCATGAAGATGCTGAATGGGT 317
BSNT_05619___ 351 TGTAAAACCTTATCCCTATAAAGACGGCGCTTATACACTTGGCTTTAGAA 400
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU36790___yw 318 TGTAAAACCTTATCCCTATAAAGACGGCGCTTATACACTTGGCTTTAGAA 367
BSNT_05619___ 401 GACATCGCAAATCGTGGCATACAATGAATGCCTGTGATGGTTTATACCTG 450
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU36790___yw 368 GACATCGCAAATCGTGGCATACAATGAATGCCTGTGATGGTTTATACCTG 417
BSNT_05619___ 451 CG-CCAAGAAGAGGATCGCCCGCTGCTGTCGCTGTTTGATTCTCTTGTTC 499
|| |||| ||||||||||||||.|||||||||||||||||||||||||.|
BSU36790___yw 418 CGTCCAA-AAGAGGATCGCCCGTTGCTGTCGCTGTTTGATTCTCTTGTGC 466
BSNT_05619___ 500 GTTCATAA 507
||||||||
BSU36790___yw 467 GTTCATAA 474
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