Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_05601 and BSU36690
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:26:37
# Commandline: needle
# -asequence dna-align/BSNT_05601___rapB.1.22522.seq
# -bsequence dna-align/BSU36690___rapB.2.22522.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_05601___rapB-BSU36690___rapB.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_05601___rapB-BSU36690___rapB.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05601___rapB
# 2: BSU36690___rapB
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1134
# Identity: 1122/1134 (98.9%)
# Similarity: 1122/1134 (98.9%)
# Gaps: 0/1134 ( 0.0%)
# Score: 5562.0
#
#
#=======================================
BSNT_05601___ 1 ATGGCCGCGTACGAGATCCCGTCATCTCAAGTAGGAGTGAAAATCAATAA 50
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU36690___ra 1 ATGGCCGCGTACGAGATCCCGTCATCTCAAGTAGGAGTGAAAATCAATAA 50
BSNT_05601___ 51 GTGGTATAAGCACATTTTAGCATTTCAAGTGGCTGATGCCGTAAAGCTGA 100
|||||||||||||||||||||||||||||||||||||||||||||.||||
BSU36690___ra 51 GTGGTATAAGCACATTTTAGCATTTCAAGTGGCTGATGCCGTAAAACTGA 100
BSNT_05601___ 101 AGGAAGAAATTGATCTAGATATCGAACAGATGGAAGAGGATCAGCTGCTT 150
|.||||||||||||||||||||||||||||||||||||||||||||||||
BSU36690___ra 101 AAGAAGAAATTGATCTAGATATCGAACAGATGGAAGAGGATCAGCTGCTT 150
BSNT_05601___ 151 CTCCTGTATTATCAGCTGATCAGCTACCGGCACCAAATTATGCTGGATTA 200
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU36690___ra 151 CTCCTGTATTATCAGCTGATCAGCTACCGGCACCAAATTATGCTGGATTA 200
BSNT_05601___ 201 TGTAAAGCCTGACCTGCACGAGGAATCTCAGCTTCAATATCGTGAATTGA 250
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU36690___ra 201 TGTAAAGCCTGACCTGCACGAGGAATCTCAGCTTCAATATCGTGAATTGA 250
BSNT_05601___ 251 TCAAAACGCTGGAAAGCAATCAGGACAGCATCTCCGGATTATCTGAGTAT 300
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU36690___ra 251 TCAAAACGCTGGAAAGCAATCAGGACAGCATCTCCGGATTATCTGAGTAT 300
BSNT_05601___ 301 TATTTTCACTTGTTTAGAGGAATGTACGAATTTGAACAGAACAATTACAT 350
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU36690___ra 301 TATTTTCACTTGTTTAGAGGAATGTACGAATTTGAACAGAACAATTACAT 350
BSNT_05601___ 351 CTCGGCTATATCCTTTTATCGGAAAGCTGAGAAGATGCTTGCGTTTGTAG 400
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU36690___ra 351 CTCGGCTATATCCTTTTATCGGAAAGCTGAGAAGATGCTTGCGTTTGTAG 400
BSNT_05601___ 401 AAGATGAAATTGAAAGAGCGGAATTTCATTTTAAAGTGGCGGAAGTCTTT 450
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU36690___ra 401 AAGATGAAATTGAAAGAGCGGAATTTCATTTTAAAGTGGCGGAAGTCTTT 450
BSNT_05601___ 451 TATATTATGAAGCAGACGCACTTTTCCATGAACCACGCTGTACAGGCGCT 500
|||||||||||||||||||||||||||||||||||.||.|||||||||||
BSU36690___ra 451 TATATTATGAAGCAGACGCACTTTTCCATGAACCATGCCGTACAGGCGCT 500
BSNT_05601___ 501 GGAGACGTATAAGGCTCACGATTTTTATAGAGTCAGAAGAATTCAATGCC 550
|||||||||||||||||||||||||||.||||||||||||||||||||||
BSU36690___ra 501 GGAGACGTATAAGGCTCACGATTTTTACAGAGTCAGAAGAATTCAATGCC 550
BSNT_05601___ 551 ATTTCGTCATATCAGGAAACTACATAGACTACAGAAATTATGAAAAAGCG 600
|||||||||||||||||||||||||.||||||||||||||||||||||||
BSU36690___ra 551 ATTTCGTCATATCAGGAAACTACATTGACTACAGAAATTATGAAAAAGCG 600
BSNT_05601___ 601 CTTGAACATTTAGATGACGCGTATCGCCTTGCTTTATTGGAAGGACAGCC 650
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU36690___ra 601 CTTGAACATTTAGATGACGCGTATCGCCTTGCTTTATTGGAAGGACAGCC 650
BSNT_05601___ 651 CCGTTTGATCGGATCAGCCCTTTATAATATCGGGAATTGCTATGATGACA 700
||||||||||||||||||||||||||||||.||.||||||||||||||||
BSU36690___ra 651 CCGTTTGATCGGATCAGCCCTTTATAATATTGGTAATTGCTATGATGACA 700
BSNT_05601___ 701 AGGGGGAGCTGGATCAGGCCGCCGAATACTTTGAAAAAGCGCTTACTGTC 750
||||||||||||||||||||||||||||||||||||||||||||.|||||
BSU36690___ra 701 AGGGGGAGCTGGATCAGGCCGCCGAATACTTTGAAAAAGCGCTTCCTGTC 750
BSNT_05601___ 751 TTCGAGGATTATCAGCTGGAACAGCTTCCAAAAGCGCTCTTCAGCCTGAC 800
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU36690___ra 751 TTCGAGGATTATCAGCTGGAACAGCTTCCAAAAGCGCTCTTCAGCCTGAC 800
BSNT_05601___ 801 TCGCGTTCTTTTCAAAAAACAAGATAGCGAAGCCGCGATGCGGTACTATG 850
|||||||||||||||||||||||||||||||||||||||.||||||||||
BSU36690___ra 801 TCGCGTTCTTTTCAAAAAACAAGATAGCGAAGCCGCGATACGGTACTATG 850
BSNT_05601___ 851 AAAAAGGGATTGCCATTGCCCAAAAACGAAACGACTTCTTCAGTCTGGCA 900
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU36690___ra 851 AAAAAGGGATTGCCATTGCCCAAAAACGAAACGACTTCTTCAGTCTGGCA 900
BSNT_05601___ 901 AAATATAAATTTCTGCAGGCATTATATGTGGAATCTGTCAATTTGGATAT 950
|||||||||||||||||||||||||||||||||||||||||||||.||||
BSU36690___ra 901 AAATATAAATTTCTGCAGGCATTATATGTGGAATCTGTCAATTTGAATAT 950
BSNT_05601___ 951 GATTCAAGAAGTATTTGATTATATGGAAGAAAAGGGCCTGTATGTATATA 1000
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU36690___ra 951 GATTCAAGAAGTATTTGATTATATGGAAGAAAAGGGCCTGTATGTATATA 1000
BSNT_05601___ 1001 TTGAAGAATTTGCTTTAGATGCTGCCTCTTATTTCAGTCATCACGAACAA 1050
||||||||||||||||||||||||||||||||||||||||||.|||||||
BSU36690___ra 1001 TTGAAGAATTTGCTTTAGATGCTGCCTCTTATTTCAGTCATCGCGAACAA 1050
BSNT_05601___ 1051 TATAAAGAAGCGGTGTATTTTTATGAAAAAGCGGTCAGCATGAGAGAGAT 1100
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU36690___ra 1051 TATAAAGAAGCGGTGTATTTTTATGAAAAAGCGGTCAGCATGAGAGAGAT 1100
BSNT_05601___ 1101 GATTCAAAGGAACGATTGTTTATATGAAGTATGA 1134
||||||||||||||||||||||||||||||||||
BSU36690___ra 1101 GATTCAAAGGAACGATTGTTTATATGAAGTATGA 1134
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