Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_05600 and BSU36680

See Amino acid alignment / Visit BSNT_05600 in genome browser / Return to Orthologue table
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# Program: needle
# Rundate: Mon  8 Mar 2010 06:26:37
# Commandline: needle
#    -asequence dna-align/BSNT_05600.1.22522.seq
#    -bsequence dna-align/BSU36680___ywmF.2.22522.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_05600-BSU36680___ywmF.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_05600-BSU36680___ywmF.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05600
# 2: BSU36680___ywmF
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 639
# Identity:     495/639 (77.5%)
# Similarity:   495/639 (77.5%)
# Gaps:         138/639 (21.6%)
# Score: 2451.0
# 
#
#=======================================

BSNT_05600         1 ATGAGACAAAACCATCTGCTGGCAGATGGTTTTTTTATATGCAAAAAAAG     50
                                                                       
BSU36680___yw      0 --------------------------------------------------      0

BSNT_05600        51 GGGAGCATCGGAACGTTTATTTCCGGGGAGAACAGGAAAAATCGCTACAG    100
                                                                       
BSU36680___yw      0 --------------------------------------------------      0

BSNT_05600       101 CACTGTTTTTTGAACAAAAGCCGTTTTGGGATGCAGATCTGCACGTGAGG    150
                                                           .||||.||||||
BSU36680___yw      1 --------------------------------------ATGCATGTGAGG     12

BSNT_05600       151 GGGAATTCAATGTTTGGTTTTAATGATATGGTGAAGTTTCTGTGGTCTTT    200
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU36680___yw     13 GGGAATTCAATGTTTGGTTTTAATGATATGGTGAAGTTTCTGTGGTCTTT     62

BSNT_05600       201 CCTCATTGTTCTGCCGCTTGTACAGATTATACATGTTTCAGGGCACAGCT    250
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU36680___yw     63 CCTCATTGTTCTGCCGCTTGTACAGATTATACATGTTTCAGGGCACAGCT    112

BSNT_05600       251 TTATGGCTTTTATTTTTGGCGGAAAAGGATCGTTGGATATAGGCATGGGA    300
                     |||||||||||||||||||||||||.||||||||||||||||||||||||
BSU36680___yw    113 TTATGGCTTTTATTTTTGGCGGAAAGGGATCGTTGGATATAGGCATGGGA    162

BSNT_05600       301 AAAACGCTGCTTAAAATTGGACCCATACGGTTCAGAACGATTTATTTTAT    350
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU36680___yw    163 AAAACGCTGCTTAAAATTGGACCCATACGGTTCAGAACGATTTATTTTAT    212

BSNT_05600       351 CGATTCTTTTTGCCGGTATGGGGAGTTGAAAATTGACAATCGATTCTCAC    400
                     ||||||||||||||||||.||||||||||||||||||||||||||||||.
BSU36680___yw    213 CGATTCTTTTTGCCGGTACGGGGAGTTGAAAATTGACAATCGATTCTCAA    262

BSNT_05600       401 ATGCACTCGTGTATGCAGGGGGCTGCTTGTTTAACCTCATCACGATTTTT    450
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU36680___yw    263 ATGCACTCGTGTATGCAGGGGGCTGCTTGTTTAACCTCATCACGATTTTT    312

BSNT_05600       451 GCAATCAATCTGCTGATTATACACAGTGTATTAAAGCCGAATGTGTTTTT    500
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU36680___yw    313 GCAATCAATCTGCTGATTATACACAGTGTATTAAAGCCGAATGTGTTTTT    362

BSNT_05600       501 TTATCAGTTTGTCTATTTTTCTACGTATTATGTGTTTTTTGCCCTGCTGC    550
                     .|||||||||||||||||||||||||||||||||||||||||||||||||
BSU36680___yw    363 CTATCAGTTTGTCTATTTTTCTACGTATTATGTGTTTTTTGCCCTGCTGC    412

BSNT_05600       551 CGGTCCGATATTCGGAGAAAAAGTCATCAGACGGGCTGGCGATATACAAG    600
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU36680___yw    413 CGGTCCGATATTCGGAGAAAAAGTCATCAGACGGGCTGGCGATATACAAG    462

BSNT_05600       601 GTGCTCCGTTACGGAGAGCGCTACGAAATCGATAAATAA    639
                     |||||||||||||||||||||||||||||||||||||||
BSU36680___yw    463 GTGCTCCGTTACGGAGAGCGCTACGAAATCGATAAATAA    501


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