Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_05580 and BSU36550

See Amino acid alignment / Visit BSNT_05580 in genome browser / Return to Orthologue table
########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:26:35
# Commandline: needle
#    -asequence dna-align/BSNT_05580___spoIIQ.1.22522.seq
#    -bsequence dna-align/BSU36550___spoIIQ.2.22522.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_05580___spoIIQ-BSU36550___spoIIQ.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_05580___spoIIQ-BSU36550___spoIIQ.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05580___spoIIQ
# 2: BSU36550___spoIIQ
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 873
# Identity:     846/873 (96.9%)
# Similarity:   846/873 (96.9%)
# Gaps:          21/873 ( 2.4%)
# Score: 4186.0
# 
#
#=======================================

BSNT_05580___      1 ATGAGAGAGGAAGAAAAGAAAACTTCTCAAGTCAAAAAACTTCAGCAGTT     50
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU36550___sp      1 ATGAGAGAGGAAGAAAAGAAAACTTCTCAAGTCAAAAAACTTCAGCAGTT     50

BSNT_05580___     51 TTTTCGTAAACGCTGGGTGTTCCCTGCAATTTACTTAGTCAGTGCGGCCG    100
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU36550___sp     51 TTTTCGTAAACGCTGGGTGTTCCCTGCAATTTACTTAGTCAGTGCGGCCG    100

BSNT_05580___    101 TCATTTTAACAGCTGTCCTTTGGTATCAATCAGTATCAAATGATGAGGTA    150
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU36550___sp    101 TCATTTTAACAGCTGTCCTTTGGTATCAATCAGTATCAAATGATGAGGTA    150

BSNT_05580___    151 AAGGATCAGTTGGCTGATAACGGCGGAAACTCCGCATATGACAACAACGA    200
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU36550___sp    151 AAGGATCAGTTGGCTGATAACGGCGGAAACTCCGCATATGACAACAACGA    200

BSNT_05580___    201 CGATGCAGTTGAAGTAGGAAAGTCAATGGAAAATGTCGCAATGCCAGTTG    250
                     |||||||||||||||||||||||||||||||||||||||||||||.||||
BSU36550___sp    201 CGATGCAGTTGAAGTAGGAAAGTCAATGGAAAATGTCGCAATGCCGGTTG    250

BSNT_05580___    251 TTGATTCTGAAAACGTTTCTGTTGTGAAAAAGTTCTATGAAACCGATGCC    300
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU36550___sp    251 TTGATTCTGAAAACGTTTCTGTTGTGAAAAAGTTCTATGAAACCGATGCC    300

BSNT_05580___    301 GCAAAAGAAGAGAAAGAAGCAGCACTCGTTACCTATAATAACACGTACAG    350
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU36550___sp    301 GCAAAAGAAGAGAAAGAAGCAGCACTCGTTACCTATAATAACACGTACAG    350

BSNT_05580___    351 CCTAAGCAAAGGAATTGACTTAGCTGAGAAAGACGGAAAAGATTTCGATG    400
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU36550___sp    351 CCTAAGCAAAGGAATTGACTTAGCTGAGAAAGACGGAAAAGATTTCGATG    400

BSNT_05580___    401 TCTCTGCTTCTCTGAGCGGTACGGTTGTTAAAGCTGAAAAAGATCCAGTG    450
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU36550___sp    401 TCTCTGCTTCTCTGAGCGGTACGGTTGTTAAAGCTGAAAAAGATCCAGTG    450

BSNT_05580___    451 CTGGGATATGTTGTGGAAGTAGAACATGCCGACGGTTTATCGACTGTGTA    500
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU36550___sp    451 CTGGGATATGTTGTGGAAGTAGAACATGCCGACGGTTTATCGACTGTGTA    500

BSNT_05580___    501 TCAATCTCTTTCCGAAGTAAGCGTTGAGCAAGGTGACAAAGTAAAACAAA    550
                     ||||||||||||||||||||||||.|||||||||||||||||||||||||
BSU36550___sp    501 TCAATCTCTTTCCGAAGTAAGCGTAGAGCAAGGTGACAAAGTAAAACAAA    550

BSNT_05580___    551 ATCAAGTGATCGGAAAATCTGGCAAGAACCTTTACAGTGAAGACAGCGGA    600
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU36550___sp    551 ATCAAGTGATCGGAAAATCTGGCAAGAACCTTTACAGTGAAGACAGCGGA    600

BSNT_05580___    601 AACCACGTACACTTTGAAATCCGTAAAGATGGGGTCGCAATGAATCCGTT    650
                     ||||||||.||||||||||||||||||||||||||.||||||||||||||
BSU36550___sp    601 AACCACGTGCACTTTGAAATCCGTAAAGATGGGGTTGCAATGAATCCGTT    650

BSNT_05580___    651 AAACTTTATGGACAAACCAGTTTCTTCTATTGAAAAAGCAGCAGCTGCTG    700
                     |||||||||||||||||||||||||||||||                   
BSU36550___sp    651 AAACTTTATGGACAAACCAGTTTCTTCTATT-------------------    681

BSNT_05580___    701 AAGAAAAAGCTGCCACCCAAGAAACAGAAGAATCAATTCAGCAATCTTCC    750
                       ||||||||||||||||||||||||||||||||.|||||||||||||||
BSU36550___sp    682 --GAAAAAGCTGCCACCCAAGAAACAGAAGAATCCATTCAGCAATCTTCC    729

BSNT_05580___    751 GAGAAAAAGGACGGATCAACTGAAAAAGGAACAGAAGAAAAATCCGGTGA    800
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU36550___sp    730 GAGAAAAAGGACGGATCAACTGAAAAAGGAACAGAAGAAAAATCCGGTGA    779

BSNT_05580___    801 GAAAAAGGATGATTCAACTGACAAATCTGGTTCCAAAGAAAGCAGCACAA    850
                     |||||||||||||||||||||||||||||||||.||||||||||||||||
BSU36550___sp    780 GAAAAAGGATGATTCAACTGACAAATCTGGTTCTAAAGAAAGCAGCACAA    829

BSNT_05580___    851 CAGAAGACACTGAACAGTCTTAA    873
                     |||||||||||||||||||||||
BSU36550___sp    830 CAGAAGACACTGAACAGTCTTAA    852


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Natto Genome Project Bacillus subtilis subsp. natto str. BEST195

DNA alignment: BSNT_05580 and BSU36550

Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
