Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_05568 and BSU36480
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:26:34
# Commandline: needle
# -asequence dna-align/BSNT_05568___ywoD.1.22522.seq
# -bsequence dna-align/BSU36480___ywoD.2.22522.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_05568___ywoD-BSU36480___ywoD.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_05568___ywoD-BSU36480___ywoD.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05568___ywoD
# 2: BSU36480___ywoD
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1359
# Identity: 1337/1359 (98.4%)
# Similarity: 1337/1359 (98.4%)
# Gaps: 0/1359 ( 0.0%)
# Score: 6597.0
#
#
#=======================================
BSNT_05568___ 1 ATGTTGTCGAAAAAAAGCCGGGCTGTTTTTTTAACAGCGGTGGCTTCGGG 50
|||||.||||||||||||||.|||||||||||||||||.|||||||||||
BSU36480___yw 1 ATGTTATCGAAAAAAAGCCGAGCTGTTTTTTTAACAGCTGTGGCTTCGGG 50
BSNT_05568___ 51 AACAATGCTGAATCCGCTGAACTCGTCTATGATCTCTCTTGCGCTCCATA 100
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU36480___yw 51 AACAATGCTGAATCCGCTGAACTCGTCTATGATCTCTCTTGCGCTCCATA 100
BSNT_05568___ 101 GCATCCAGCATGAGTTTCACCTCTCGTTTACAACGGTTTCCTGGCTGATT 150
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU36480___yw 101 GCATCCAGCATGAGTTTCACCTCTCGTTTACAACGGTTTCCTGGCTGATT 150
BSNT_05568___ 151 TCCTCGTTTTACTTGGCGAGTGCCGTAGCGCAGCCGGTTACGGGAAAGCT 200
|||||||||||||||||||||||||||||||||||.||.|||||||||||
BSU36480___yw 151 TCCTCGTTTTACTTGGCGAGTGCCGTAGCGCAGCCCGTAACGGGAAAGCT 200
BSNT_05568___ 201 CGGTGATTTGATTGGGCGGAAACGCTTGTTTTTATTCGGGCTTATTCTTG 250
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU36480___yw 201 CGGTGATTTGATTGGGCGGAAACGCTTGTTTTTATTCGGGCTTATTCTTG 250
BSNT_05568___ 251 TTGCGGTTTCTGCCATCGGGGCGCCGTTTGCGCCGACGTTTATGACATTA 300
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU36480___yw 251 TTGCGGTTTCTGCCATCGGGGCGCCGTTTGCGCCGACGTTTATGACATTA 300
BSNT_05568___ 301 TTGGTCATGCGGCTGTTTCAATCGGTGGGGAGCAGCGCGATTTATCCGTC 350
|||||||||||||||||||||||||||||||||||.||||||||||||||
BSU36480___yw 301 TTGGTCATGCGGCTGTTTCAATCGGTGGGGAGCAGTGCGATTTATCCGTC 350
BSNT_05568___ 351 AGGTGTCGGCTTGATTCGGAATCATATTCATGAGCGCCAAGCTTCAGCCT 400
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU36480___yw 351 AGGTGTCGGCTTGATTCGGAATCATATTCATGAGCGCCAAGCTTCAGCCT 400
BSNT_05568___ 401 TGGCTGTACTCTCTATTTTTGCGTCCGCCATGACGGCGCTGGGGCCGACA 450
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU36480___yw 401 TGGCTGTACTCTCTATTTTTGCGTCCGCCATGACGGCGCTGGGGCCGACA 450
BSNT_05568___ 451 GTCGGCGGTTTTTTGATTGTATGGGGAGGCTGGCCGGCGATCTTTATCGT 500
|.||||||.|||||||||||||||||||||||||||||||||||||||||
BSU36480___yw 451 GCCGGCGGGTTTTTGATTGTATGGGGAGGCTGGCCGGCGATCTTTATCGT 500
BSNT_05568___ 501 TAATTTGCCGTTTATTATCCTCAGCTTCTTATTGGGCCTGTATATGTTCC 550
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU36480___yw 501 TAATTTGCCGTTTATTATCCTCAGCTTCTTATTGGGCCTGTATATGTTCC 550
BSNT_05568___ 551 CGAAAGATCAGAAAAAAGGGGCAGGAATCAAAACCATTATTCAGCAGCTC 600
||||||||||||||||||||||||||||||||||||||||||.|||||||
BSU36480___yw 551 CGAAAGATCAGAAAAAAGGGGCAGGAATCAAAACCATTATTCGGCAGCTC 600
BSNT_05568___ 601 GACATTCTTGGAATTGTTTTATTTGCCGGGGGAATCATTTTCCTTCTATC 650
||.|||||||||||||||||||||||||||||||||||||||||||||||
BSU36480___yw 601 GATATTCTTGGAATTGTTTTATTTGCCGGGGGAATCATTTTCCTTCTATC 650
BSNT_05568___ 651 CTTTTTGCTGTCGTTCAGCACGTCGCCGCATGCGGTTGAAGGTGTGCTTG 700
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU36480___yw 651 CTTTTTGCTGTCGTTCAGCACGTCGCCGCATGCGGTTGAAGGTGTGCTTG 700
BSNT_05568___ 701 GCTTGCTTCTGCTCTGTGCGTTTGTCTGGCGCGAGCTGAAAACGGATAAG 750
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU36480___yw 701 GCTTGCTTCTGCTCTGTGCGTTTGTCTGGCGCGAGCTGAAAACGGATAAG 750
BSNT_05568___ 751 CCGTTTATTGATGTCCGTCTGTTTAAAACACAGCGAAACCTGTCAGCCGT 800
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU36480___yw 751 CCGTTTATTGATGTCCGTCTGTTTAAAACACAGCGAAACCTGTCAGCCGT 800
BSNT_05568___ 801 GTATGTTCAGTTTATTTTATTGAATGTTTTCTTCTATTGTTTATTTTTTG 850
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU36480___yw 801 GTATGTTCAGTTTATTTTATTGAATGTTTTCTTCTATTGTTTATTTTTTG 850
BSNT_05568___ 851 GTCTGCCAAGTTACTTTCAGGATGAAATGCATCTTTCTGTTCAAACGAGC 900
||.|||||||||||||||||||||||||||||||||||||||||||||||
BSU36480___yw 851 GTTTGCCAAGTTACTTTCAGGATGAAATGCATCTTTCTGTTCAAACGAGC 900
BSNT_05568___ 901 GGCCTGTTTATGCTGTTTATGTCTGGAATGAGCATCGTTGTGTCACCTTT 950
||||||||||||||||||||||||||||||||||||||||||||||||.|
BSU36480___yw 901 GGCCTGTTTATGCTGTTTATGTCTGGAATGAGCATCGTTGTGTCACCTCT 950
BSNT_05568___ 951 AACTGGAAAATGGATCGACCGATCTGGTGTCGTCAAACCGATCTTTGCGG 1000
|||.||.|||||||||||||||||||||||||||||.|||||||||||||
BSU36480___yw 951 AACCGGCAAATGGATCGACCGATCTGGTGTCGTCAAGCCGATCTTTGCGG 1000
BSNT_05568___ 1001 GAGCGCTTTTGATGACGGCTGGAGCCGTGCTCTTAACCATCTTTTTTATC 1050
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU36480___yw 1001 GAGCGCTTTTGATGACGGCTGGAGCCGTGCTCTTAACCATCTTTTTTATC 1050
BSNT_05568___ 1051 AATGTCGAGACCATTGGGAAAGGCCTCATTCTATCGCTCTTGGGTATAGG 1100
||||||.|||||||.||.||||||||||||||.|||||||||||||||||
BSU36480___yw 1051 AATGTCCAGACCATCGGTAAAGGCCTCATTCTGTCGCTCTTGGGTATAGG 1100
BSNT_05568___ 1101 CTACGGACTGGGAAATGTCGCGCTTCAGGCAGCGATGCTGAAAACGAGTC 1150
||||||||||||.|||||||||||||||||||||||||||.|||||||||
BSU36480___yw 1101 CTACGGACTGGGCAATGTCGCGCTTCAGGCAGCGATGCTGGAAACGAGTC 1150
BSNT_05568___ 1151 CTTCCAACATGGTAGGAACGACTTCAGGCCTGTTTCAAACCTGCCGTTAC 1200
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU36480___yw 1151 CTTCCAACATGGTAGGAACGACTTCAGGCCTGTTTCAAACCTGCCGTTAC 1200
BSNT_05568___ 1201 CTAGGATCGATTTTGTCTTCGGTGATCCTTGGCATTCTTTTTGGTAAAGA 1250
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU36480___yw 1201 CTAGGATCGATTTTGTCTTCGGTGATCCTTGGCATTCTTTTTGGTAAAGA 1250
BSNT_05568___ 1251 AATCACGGCAGCCCATTTTGATATGATGGGAATCATTATGATCATAGCGG 1300
||||||||||||||||||||||||||||||||||||||||||.|||||||
BSU36480___yw 1251 AATCACGGCAGCCCATTTTGATATGATGGGAATCATTATGATTATAGCGG 1300
BSNT_05568___ 1301 GCGGAGCAAGCCTGTTAATGGCTGTGAGATTTGCTGCATTAATGAAAACT 1350
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU36480___yw 1301 GCGGAGCAAGCCTGTTAATGGCTGTGAGATTTGCTGCATTAATGAAAACT 1350
BSNT_05568___ 1351 GCATCTTAA 1359
|||||||||
BSU36480___yw 1351 GCATCTTAA 1359
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