Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_05562 and BSU36440

See Amino acid alignment / Visit BSNT_05562 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:26:33
# Commandline: needle
#    -asequence dna-align/BSNT_05562___ywoH.1.22522.seq
#    -bsequence dna-align/BSU36440___ywoH.2.22522.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_05562___ywoH-BSU36440___ywoH.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_05562___ywoH-BSU36440___ywoH.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05562___ywoH
# 2: BSU36440___ywoH
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 414
# Identity:     411/414 (99.3%)
# Similarity:   411/414 (99.3%)
# Gaps:           0/414 ( 0.0%)
# Score: 2043.0
# 
#
#=======================================

BSNT_05562___      1 ATGTCCTACGTCAACAGACACCTCATTCATCAAATCAACCAAAGCGCCCG     50
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU36440___yw      1 ATGTCCTACGTCAACAGACACCTCATTCATCAAATCAACCAAAGCGCCCG     50

BSNT_05562___     51 CCTGATTGCCAAGAAAGCCAATGAACAGCTAGAGCCATTCGGCCTTTATT    100
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU36440___yw     51 CCTGATTGCCAAGAAAGCCAATGAACAGCTAGAGCCATTCGGCCTTTATT    100

BSNT_05562___    101 CATCCCAATGGTCAGTTTTATATTGTTTGCGTACGATCGGACCAATGACT    150
                     ||||.|||||||||||||||||||||||||||||||||||||||||||||
BSU36440___yw    101 CATCTCAATGGTCAGTTTTATATTGTTTGCGTACGATCGGACCAATGACT    150

BSNT_05562___    151 CAAAAAGAGATTTGGTCCTATTTAAATGTGGAAGCGCCGACTGTGACTCG    200
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU36440___yw    151 CAAAAAGAGATTTGGTCCTATTTAAATGTGGAAGCGCCGACTGTGACTCG    200

BSNT_05562___    201 GACGATCAAACGCCTGGAGGAGAACGGCTGGGTTCAGAGACGGCAAGGTG    250
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU36440___yw    201 GACGATCAAACGCCTGGAGGAGAACGGCTGGGTTCAGAGACGGCAAGGTG    250

BSNT_05562___    251 AAGACAAACGGGAAAAACTTGTTGTCCTCACAAAAGAAGCCGAGAAAAAA    300
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU36440___yw    251 AAGACAAACGGGAAAAACTTGTTGTCCTCACAAAAGAAGCCGAGAAAAAA    300

BSNT_05562___    301 TACGAAGAAATCAATGTGAAAATGCTGAAATTCGAGGAAGAGCTGCTTGC    350
                     ||||||||||||||||||||||||.|||||||||||||||||||||||||
BSU36440___yw    301 TACGAAGAAATCAATGTGAAAATGTTGAAATTCGAGGAAGAGCTGCTTGC    350

BSNT_05562___    351 TGATTTCCGGGATGAAGATAAAGAAGCTTTTTCTCATTTATTCCGCATGT    400
                     .|||||||||||||||||||||||||||||||||||||||||||||||||
BSU36440___yw    351 AGATTTCCGGGATGAAGATAAAGAAGCTTTTTCTCATTTATTCCGCATGT    400

BSNT_05562___    401 TTTTACAACAATGA    414
                     ||||||||||||||
BSU36440___yw    401 TTTTACAACAATGA    414


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