Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_05559 and BSU36400

See Amino acid alignment / Visit BSNT_05559 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:26:32
# Commandline: needle
#    -asequence dna-align/BSNT_05559___flhO.1.22522.seq
#    -bsequence dna-align/BSU36400___flhO.2.22522.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_05559___flhO-BSU36400___flhO.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_05559___flhO-BSU36400___flhO.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05559___flhO
# 2: BSU36400___flhO
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 813
# Identity:     794/813 (97.7%)
# Similarity:   794/813 (97.7%)
# Gaps:           0/813 ( 0.0%)
# Score: 3894.0
# 
#
#=======================================

BSNT_05559___      1 TTGTTAAAAGGATTATATACAGCAACATCCGCAATGATTGCCCAGCAGCG     50
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU36400___fl      1 TTGTTAAAAGGATTATATACAGCAACATCCGCAATGATTGCCCAGCAGCG     50

BSNT_05559___     51 AAGAACGGAAATGCTTTCAAATAATATTGCTAACGCAAATACATCAGGAT    100
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU36400___fl     51 AAGAACGGAAATGCTTTCAAATAATATTGCTAACGCAAATACATCAGGAT    100

BSNT_05559___    101 ATAAAGCTGATCAAGGCTCGATGCGCGCGTTCCCTGAAATGCTGCTCAGC    150
                     |||||||||||||||||||.|||||||||||||||||.||||||||||||
BSU36400___fl    101 ATAAAGCTGATCAAGGCTCTATGCGCGCGTTCCCTGAGATGCTGCTCAGC    150

BSNT_05559___    151 AGAATAGAATCAAAATCTCCGGCCGGGACATCGAGGACGGAAATCGGTTC    200
                     ||||||||||||||||||||||||||||||||.|||||||||||||||||
BSU36400___fl    151 AGAATAGAATCAAAATCTCCGGCCGGGACATCAAGGACGGAAATCGGTTC    200

BSNT_05559___    201 CGTGAATACCGGAGTATATATGCAGGAGCTTAAGCCTCTCTTTACACAGG    250
                     ||||||||||||||||||||||||||||||.|||||||||||||||||||
BSU36400___fl    201 CGTGAATACCGGAGTATATATGCAGGAGCTCAAGCCTCTCTTTACACAGG    250

BSNT_05559___    251 GAAGCCTGAAGTCCACAGACCAGCCTATAGACATTGCATTGATCGAAAAT    300
                     |||||||||||||||||||||||||||.||||||||||||||||||||||
BSU36400___fl    251 GAAGCCTGAAGTCCACAGACCAGCCTACAGACATTGCATTGATCGAAAAT    300

BSNT_05559___    301 CAAGTTCCGATGAATGCGGAAACCAATGAAAACGCGGCTCTTTTTTATCC    350
                     |||||||||||||.||||||||||||||||||.||.||||||||||||||
BSU36400___fl    301 CAAGTTCCGATGAGTGCGGAAACCAATGAAAAAGCTGCTCTTTTTTATCC    350

BSNT_05559___    351 GGTTCAAACAGCGGATGGAATCCGTTACTCAAAAAGCAGCACATTTTCAT    400
                     |||||||||||||||||||||||||||.|||||||||||||||||||||.
BSU36400___fl    351 GGTTCAAACAGCGGATGGAATCCGTTATTCAAAAAGCAGCACATTTTCAC    400

BSNT_05559___    401 TAAATGAGAACAATCAACTGACGATCAACGGACGCCCTGTTTTATCGACG    450
                     ||||||||||||||||.|||||||||||||||||||||.|||||||||||
BSU36400___fl    401 TAAATGAGAACAATCAGCTGACGATCAACGGACGCCCTATTTTATCGACG    450

BSNT_05559___    451 GATCGCCAGCCAATCACTGTTGATAATGAGAATTTCACTGTGTCTGAAAA    500
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU36400___fl    451 GATCGCCAGCCAATCACTGTTGATAATGAGAATTTCACTGTGTCTGAAAA    500

BSNT_05559___    501 CGGTACTGTGACAACGAACGGACGGACAGCCGGCCAGATTGATGTCAGAA    550
                     ||||||||||||||||||||||||.|||||||||||||||||||||||||
BSU36400___fl    501 CGGTACTGTGACAACGAACGGACGCACAGCCGGCCAGATTGATGTCAGAA    550

BSNT_05559___    551 TGGCGGAAGATGTCCGCAATCTCAAACGGGACGGAAATGATTTGTACAGC    600
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU36400___fl    551 TGGCGGAAGATGTCCGCAATCTCAAACGGGACGGAAATGATTTGTACAGC    600

BSNT_05559___    601 ACGGCGGACGGTAATGATCTGCCAAGCGCAGCCGGAAACAATCAGGTATC    650
                     ||||||||||||||||||||||||||||||||||||||.|||||||||.|
BSU36400___fl    601 ACGGCGGACGGTAATGATCTGCCAAGCGCAGCCGGAAATAATCAGGTAGC    650

BSNT_05559___    651 TTATTCATTAAAACAAGGCGTCTCAGAGCTTTCAAACGTGGATGTGACAA    700
                     .|||||||||||||||||||||||||||||||||||||||||||||||||
BSU36400___fl    651 CTATTCATTAAAACAAGGCGTCTCAGAGCTTTCAAACGTGGATGTGACAA    700

BSNT_05559___    701 GCGCCTATACAGAAATGACTGAAGCGTACAGATCGTTTGAGGCCAATCAG    750
                     |||||||||||||||||||||||||||||||||||||||||||.||||||
BSU36400___fl    701 GCGCCTATACAGAAATGACTGAAGCGTACAGATCGTTTGAGGCGAATCAG    750

BSNT_05559___    751 AAGGTTATTCAGGCTTACGATAAAAGTATGGATAAAGCAGCAAATGAGAT    800
                     |||||||||||||||||||||||||||||||||||||||||||||||.||
BSU36400___fl    751 AAGGTTATTCAGGCTTACGATAAAAGTATGGATAAAGCAGCAAATGAAAT    800

BSNT_05559___    801 CGGAAAAATTTAA    813
                     .||||||||||||
BSU36400___fl    801 TGGAAAAATTTAA    813


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