Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_05555 and BSU36380
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:26:32
# Commandline: needle
# -asequence dna-align/BSNT_05555___rapD.1.22522.seq
# -bsequence dna-align/BSU36380___rapD.2.22522.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_05555___rapD-BSU36380___rapD.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_05555___rapD-BSU36380___rapD.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05555___rapD
# 2: BSU36380___rapD
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1065
# Identity: 1055/1065 (99.1%)
# Similarity: 1055/1065 (99.1%)
# Gaps: 0/1065 ( 0.0%)
# Score: 5235.0
#
#
#=======================================
BSNT_05555___ 1 ATGATTTCGAAGTTTATTGAAAAAAGAATGCTAAACATGTTAGACGAGTG 50
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU36380___ra 1 ATGATTTCGAAGTTTATTGAAAAAAGAATGCTAAACATGTTAGACGAGTG 50
BSNT_05555___ 51 GTATTCCGCAATGAGCAAACGCAAAATGAATCACGTTTGCACACTGAAAG 100
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU36380___ra 51 GTATTCCGCAATGAGCAAACGCAAAATGAATCACGTTTGCACACTGAAAG 100
BSNT_05555___ 101 AGAAAATTGACCAGCACCTTCCAAAGATCAAAAAGAACACAAAACTTTGG 150
||||||||||.|||||||||||||||||||||||||||||||||||||||
BSU36380___ra 101 AGAAAATTGATCAGCACCTTCCAAAGATCAAAAAGAACACAAAACTTTGG 150
BSNT_05555___ 151 ATGCGTTATCAATTGTTTCAGGCCCGCCATCAGCTGCTTTTTGAAAACCA 200
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU36380___ra 151 ATGCGTTATCAATTGTTTCAGGCCCGCCATCAGCTGCTTTTTGAAAACCA 200
BSNT_05555___ 201 GAACGGACTCGATTCATTGTTCGATGACCTATATGGCCTGGAAGACAAAA 250
||||||||||||||||||||||||||.|||||||||||||||||||||||
BSU36380___ra 201 GAACGGACTCGATTCATTGTTCGATGGCCTATATGGCCTGGAAGACAAAA 250
BSNT_05555___ 251 TGGATGATGAATTGAAATATTATCTGTATTTTTTCTCTGGGTTATATGAG 300
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU36380___ra 251 TGGATGATGAATTGAAATATTATCTGTATTTTTTCTCTGGGTTATATGAG 300
BSNT_05555___ 301 ATGGTAAAAACAGCTCCGAAACATGCAGTACATCATTTTAAAAAAGCTGA 350
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU36380___ra 301 ATGGTAAAAACAGCTCCGAAACATGCAGTACATCATTTTAAAAAAGCTGA 350
BSNT_05555___ 351 ACAGTACCTGGCCGCCATTCAAAATACGTTTGAAGCCGCTGATTTATATT 400
|||||||||||||||||||||.||||||||||||||||||||||||||||
BSU36380___ra 351 ACAGTACCTGGCCGCCATTCACAATACGTTTGAAGCCGCTGATTTATATT 400
BSNT_05555___ 401 ATCAAACCGCCGGCGCCTATTACTTGATGAAATCACCGCCGCTTTCCATC 450
|||||||||||||||||||||||||||||||||||||||||||||||.||
BSU36380___ra 401 ATCAAACCGCCGGCGCCTATTACTTGATGAAATCACCGCCGCTTTCCGTC 450
BSNT_05555___ 451 CAATACGTCAAAAAAGCATTACACATCTATTTGCACCAATTCGGCTATAT 500
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU36380___ra 451 CAATACGTCAAAAAAGCATTACACATCTATTTGCACCAATTCGGCTATAT 500
BSNT_05555___ 501 CAAAAAGGTAATCACCTGTAAGCTTTTGCTCGCCGTGAATTATATTGATC 550
|||||||||||||||||||||.||||||||||||||||||||||||||||
BSU36380___ra 501 CAAAAAGGTAATCACCTGTAAACTTTTGCTCGCCGTGAATTATATTGATC 550
BSNT_05555___ 551 AAGAACGCTATGAAAAAGCTGAACAGCTTTTCAAAGAAATCATTAAGAAA 600
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU36380___ra 551 AAGAACGCTATGAAAAAGCTGAACAGCTTTTCAAAGAAATCATTAAGAAA 600
BSNT_05555___ 601 ACCCAGCAACTACATGACGAAAACCTGCTATGCCACGCTTATTATAACCT 650
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU36380___ra 601 ACCCAGCAACTACATGACGAAAACCTGCTATGCCACGCTTATTATAACCT 650
BSNT_05555___ 651 TGGCTTTTTAAAAGCGACCGAGAAAAAAGACCAGGAAGCGCTTCTTTACT 700
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU36380___ra 651 TGGCTTTTTAAAAGCGACCGAGAAAAAAGACCAGGAAGCGCTTCTTTACT 700
BSNT_05555___ 701 TTAGAAAAGTATTAAAGAATCAAGAATTTGAAATGAATTCACCAGTCTCA 750
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU36380___ra 701 TTAGAAAAGTATTAAAGAATCAAGAATTTGAAATGAATTCACCAGTCTCA 750
BSNT_05555___ 751 TATCTTCATTGTGTGTACGAGTCTGTCAGAGCGCTTTTTAAAACAGGGAA 800
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU36380___ra 751 TATCTTCATTGTGTGTACGAGTCTGTCAGAGCGCTTTTTAAAACAGGGAA 800
BSNT_05555___ 801 CATCACAGAAGCTAAAGCCGTCCTTCAAAAAGGAAAAGAATTATCTGAAA 850
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU36380___ra 801 CATCACAGAAGCTAAAGCCGTCCTTCAAAAAGGAAAAGAATTATCTGAAA 850
BSNT_05555___ 851 AGGTAGACATTCAAACCATTTATTTAAAATTAAAAACGCTTGAAGCCCTC 900
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU36380___ra 851 AGGTAGACATTCAAACCATTTATTTAAAATTAAAAACGCTTGAAGCCCTC 900
BSNT_05555___ 901 TACACCTCAGTGGAAGATCCCTATGAGCAGCTGCTCGAATATGTGCTTGA 950
|||||.||||..|||||.||.|||||||||||||||||||||||||||||
BSU36380___ra 901 TACACATCAGCCGAAGACCCTTATGAGCAGCTGCTCGAATATGTGCTTGA 950
BSNT_05555___ 951 ATTAGAAAAAATCGAGGCGTGGGTGGATTTAGAAGTGCTGTTAGAAGATA 1000
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU36380___ra 951 ATTAGAAAAAATCGAGGCGTGGGTGGATTTAGAAGTGCTGTTAGAAGATA 1000
BSNT_05555___ 1001 TTACGGAATACTACAAAAAAAAGGACGATTTCGAAAAAGCCGCTTTTTTT 1050
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU36380___ra 1001 TTACGGAATACTACAAAAAAAAGGACGATTTCGAAAAAGCCGCTTTTTTT 1050
BSNT_05555___ 1051 ATCATGCGCGGCTGA 1065
|||||||||||||||
BSU36380___ra 1051 ATCATGCGCGGCTGA 1065
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