Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_05553 and BSU36360
See
Amino acid alignment /
Visit
BSNT_05553 in genome browser /
Return to
Orthologue table
########################################
# Program: needle
# Rundate: Mon 8 Mar 2010 06:26:32
# Commandline: needle
# -asequence dna-align/BSNT_05553.1.22522.seq
# -bsequence dna-align/BSU36360___mscL.2.22522.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_05553-BSU36360___mscL.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_05553-BSU36360___mscL.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05553
# 2: BSU36360___mscL
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 468
# Identity: 388/468 (82.9%)
# Similarity: 388/468 (82.9%)
# Gaps: 75/468 (16.0%)
# Score: 1909.0
#
#
#=======================================
BSNT_05553 1 TTGAAAAAAGGCAAATGGCCAGCGGCACATTTGTCTTTTTTTCTTTACAA 50
BSU36360___ms 0 -------------------------------------------------- 0
BSNT_05553 51 ATATAGAAAAGCAGGTGATTGTATGTGGAATGAATTTAAAGCCTTTGCCA 100
||||||||||||||||||||||||||||
BSU36360___ms 1 ----------------------ATGTGGAATGAATTTAAAGCCTTTGCCA 28
BSNT_05553 101 TGCGGGGGAATATCGTAGACCTTGCGATTGGTGTTGTGATAGGCGGCGCT 150
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU36360___ms 29 TGCGGGGGAATATCGTAGACCTTGCGATTGGTGTTGTGATAGGCGGCGCT 78
BSNT_05553 151 TTCGGAAAGATCGTCACATCTCTAGTAAATGATATCATTATGCCTTTGGT 200
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU36360___ms 79 TTCGGAAAGATCGTCACATCTCTAGTAAATGATATCATTATGCCTTTGGT 128
BSNT_05553 201 CGGTTTGCTGCTGGGAGGGCTTGACTTTTCAGGCCTGTCGTTTACGTTTG 250
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU36360___ms 129 CGGTTTGCTGCTGGGAGGGCTTGACTTTTCAGGCCTGTCGTTTACGTTTG 178
BSNT_05553 251 GCGATGCTGTAGTGAAATATGGAAGCTTTATACAGACGATTGTGAACTTC 300
||||||||||||||||||||||.|||||||||||||||||||||||||||
BSU36360___ms 179 GCGATGCTGTAGTGAAATATGGCAGCTTTATACAGACGATTGTGAACTTC 228
BSNT_05553 301 TTAATTATATCGTTCTCCATTTTTATCGTCATTCGGACTTTGAATGGGTT 350
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU36360___ms 229 TTAATTATATCGTTCTCCATTTTTATCGTCATTCGGACTTTGAATGGGTT 278
BSNT_05553 351 AAGGCGCAAAAAAGAAGCAGCAGAAGAAGAGGCTGCGGAGGAAGCGATGG 400
||||||||||||||| ||||||||||||||||||||||||||||.|||
BSU36360___ms 279 AAGGCGCAAAAAAGA---AGCAGAAGAAGAGGCTGCGGAGGAAGCGGTGG 325
BSNT_05553 401 ATGCGCAGGAGGAGCTCCTGAAAGAAATCAGAGACCTGCTGAAGCAGCAA 450
||||||||||||||||.|||||||||||||||||||||||||||||||||
BSU36360___ms 326 ATGCGCAGGAGGAGCTGCTGAAAGAAATCAGAGACCTGCTGAAGCAGCAA 375
BSNT_05553 451 GCAAAGTCTTCGGAATAA 468
||||||||..||||||||
BSU36360___ms 376 GCAAAGTCGCCGGAATAA 393
#---------------------------------------
#---------------------------------------
Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.