Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_05549 and BSU36340

See Amino acid alignment / Visit BSNT_05549 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:26:31
# Commandline: needle
#    -asequence dna-align/BSNT_05549___ywpE.1.22522.seq
#    -bsequence dna-align/BSU36340___ywpE.2.22522.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_05549___ywpE-BSU36340___ywpE.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_05549___ywpE-BSU36340___ywpE.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05549___ywpE
# 2: BSU36340___ywpE
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 309
# Identity:     301/309 (97.4%)
# Similarity:   301/309 (97.4%)
# Gaps:           0/309 ( 0.0%)
# Score: 1473.0
# 
#
#=======================================

BSNT_05549___      1 ATGCGCCCGGATCAAAAAATGGGTGAGGGAAATTATCCGTTGGCGGGCCA     50
                     |||||||.||||||||||||||||||||||||||||||||||||||||||
BSU36340___yw      1 ATGCGCCGGGATCAAAAAATGGGTGAGGGAAATTATCCGTTGGCGGGCCA     50

BSNT_05549___     51 TCATTTGAAGCAAAAGAATCTTCTGTTCGGACCTCTGGAAAACATAAAAA    100
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU36340___yw     51 TCATTTGAAGCAAAAGAATCTTCTGTTCGGACCTCTGGAAAACATAAAAA    100

BSNT_05549___    101 CAGGTGCCCAAATTGTCATCACGGATTTTAAAAAGGATTATATCTATTCT    150
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU36340___yw    101 CAGGTGCCCAAATTGTCATCACGGATTTTAAAAAGGATTATATCTATTCT    150

BSNT_05549___    151 GTAACATCTAAAGACATCATATCGGAAATGGATGCAGATGTAATTGAGGA    200
                     ||||||||.|||||||||||||||||||||||||||||||||.|||||||
BSU36340___yw    151 GTAACATCGAAAGACATCATATCGGAAATGGATGCAGATGTAGTTGAGGA    200

BSNT_05549___    201 GACAAACAAAAAAGAGATTACGCTAATCACATGTGACAAGGCTGTCAAAA    250
                     ||||||||||||.|||||||||.|||||||||||||||||||.|||||||
BSU36340___yw    201 GACAAACAAAAAGGAGATTACGTTAATCACATGTGACAAGGCGGTCAAAA    250

BSNT_05549___    251 CTGAAGGGCGCCTTGTTGTGAAAGGGGAATTGGTTGATTCTTTTGGCCAT    300
                     |.|||||||||||.||||||||||||||||||||||||||||||||||||
BSU36340___yw    251 CCGAAGGGCGCCTCGTTGTGAAAGGGGAATTGGTTGATTCTTTTGGCCAT    300

BSNT_05549___    301 ACAAATTAA    309
                     |||||||||
BSU36340___yw    301 ACAAATTAA    309


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