Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_05541 and BSU36300

See Amino acid alignment / Visit BSNT_05541 in genome browser / Return to Orthologue table
########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:26:31
# Commandline: needle
#    -asequence dna-align/BSNT_05541___glcR.1.22522.seq
#    -bsequence dna-align/BSU36300___glcR.2.22522.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_05541___glcR-BSU36300___glcR.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_05541___glcR-BSU36300___glcR.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05541___glcR
# 2: BSU36300___glcR
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 804
# Identity:     774/804 (96.3%)
# Similarity:   774/804 (96.3%)
# Gaps:          27/804 ( 3.4%)
# Score: 3858.0
# 
#
#=======================================

BSNT_05541___      1 ATGATTGCTGAGAAAAGGAATGAGGGCGTGTACCAAGAAGAAAGATTAGT     50
                                                |||||||||||||||||||||||
BSU36300___gl      1 ---------------------------GTGTACCAAGAAGAAAGATTAGT     23

BSNT_05541___     51 AGCGATTTTGGATTTTTTAAAACAGCATAACCGAATTACAACGGAGCAGA    100
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU36300___gl     24 AGCGATTTTGGATTTTTTAAAACAGCATAACCGAATTACAACGGAGCAGA     73

BSNT_05541___    101 TCTGTACGCTCCTGCAAGTGTCAAGGGATACAGCGCGACGAGATCTTGTG    150
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU36300___gl     74 TCTGTACGCTCCTGCAAGTGTCAAGGGATACAGCGCGACGAGATCTTGTG    123

BSNT_05541___    151 AAACTTGAGGAACAGAATGCCATCATCCGCACAAGAGGCGGCGCCATTTT    200
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU36300___gl    124 AAACTTGAGGAACAGAATGCCATCATCCGCACAAGAGGCGGCGCCATTTT    173

BSNT_05541___    201 ACCGACTGTGCATCAGAAAATTCAAAGCTATTCCGGCCGCCTGAAAACAG    250
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU36300___gl    174 ACCGACTGTGCATCAGAAAATTCAAAGCTATTCCGGCCGCCTGAAAACAG    223

BSNT_05541___    251 TGTCTGAGGAAAAAAATAAGATCGGCAGGCTTGCAGCATCGCTTATTCAT    300
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU36300___gl    224 TGTCTGAGGAAAAAAATAAGATCGGCAGGCTTGCAGCATCGCTTATTCAT    273

BSNT_05541___    301 GATGGAGACCGGGTGATTTTAGACGCCTCTACAACTGTTCAGGCATGTGC    350
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU36300___gl    274 GATGGAGACCGGGTGATTTTAGACGCCTCTACAACTGTTCAGGCATGTGC    323

BSNT_05541___    351 AAAGCATTTGAATGCGGTTGATTGTACCGTAATCACCAATTCGATTAATC    400
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU36300___gl    324 AAAGCATTTGAATGCGGTTGATTGTACCGTAATCACCAATTCGATTAATC    373

BSNT_05541___    401 TTGCGGATGTGCTGTCCGATAAAGAGGGAATTGAAATTTATCTGCTGGGA    450
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU36300___gl    374 TTGCGGATGTGCTGTCCGATAAAGAGGGAATTGAAATTTATCTGCTGGGA    423

BSNT_05541___    451 GGCAAGCTGGAAAAGGAGCACCGCTTTCTGTACGGGTCCTCTGTGATTGA    500
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU36300___gl    424 GGCAAGCTGGAAAAGGAGCACCGCTTTCTGTACGGGTCCTCTGTGATTGA    473

BSNT_05541___    501 AAAGCTCTCAAGCTACCATGTTGATAAAGCGCTGATTGGTGTGGTCGGCA    550
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU36300___gl    474 AAAGCTCTCAAGCTACCATGTTGATAAAGCGCTGATTGGTGTGGTCGGCA    523

BSNT_05541___    551 TTTCCGAACATGGCATTACAATTGCGCATGAAGAGGATGGCATGGTGAAG    600
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU36300___gl    524 TTTCCGAACATGGCATTACAATTGCGCATGAAGAGGATGGCATGGTGAAG    573

BSNT_05541___    601 CGGAAAATGATACAGCAGGCAAAGCAGGTAATCGCGCTTGCAGACCATTC    650
                     ||||||||||||||||||||||||||||||||.|||||||||||||||||
BSU36300___gl    574 CGGAAAATGATACAGCAGGCAAAGCAGGTAATTGCGCTTGCAGACCATTC    623

BSNT_05541___    651 TAAGCTGGGCAGCACCAGTTTTTATCAGTATGCGGAGCTGAATGAAATCG    700
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU36300___gl    624 TAAGCTGGGCAGCACCAGTTTTTATCAGTATGCGGAGCTGAATGAAATCG    673

BSNT_05541___    701 ACCTTTTGATTACAGACAGGCTTCCGAATCAGGCATTTTGTGACTTGCTT    750
                     ||||.|||||||||||||||||.|||||||||||||||||||||||||||
BSU36300___gl    674 ACCTCTTGATTACAGACAGGCTGCCGAATCAGGCATTTTGTGACTTGCTT    723

BSNT_05541___    751 GACCGAAACGGCGTTGAGCTTCTCGTGACAGAGCAGGATGAAGGAAAGGA    800
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU36300___gl    724 GACCGAAACGGCGTTGAGCTTCTCGTGACAGAGCAGGATGAAGGAAAGGA    773

BSNT_05541___    801 CTGA    804
                     ||||
BSU36300___gl    774 CTGA    777


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Natto Genome Project Bacillus subtilis subsp. natto str. BEST195

DNA alignment: BSNT_05541 and BSU36300

Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
