Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_05540 and BSU36290

See Amino acid alignment / Visit BSNT_05540 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:26:31
# Commandline: needle
#    -asequence dna-align/BSNT_05540___ywpJ.1.22522.seq
#    -bsequence dna-align/BSU36290___ywpJ.2.22522.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_05540___ywpJ-BSU36290___ywpJ.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_05540___ywpJ-BSU36290___ywpJ.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05540___ywpJ
# 2: BSU36290___ywpJ
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 858
# Identity:     844/858 (98.4%)
# Similarity:   844/858 (98.4%)
# Gaps:           0/858 ( 0.0%)
# Score: 4164.0
# 
#
#=======================================

BSNT_05540___      1 GTGAAATTAATTGCGATTGATTTAGATGGAACCTTACTCAACAGCAAGCA     50
                     ||||||||||||||||||||.|||||||||||||||||||||||||||||
BSU36290___yw      1 GTGAAATTAATTGCGATTGACTTAGATGGAACCTTACTCAACAGCAAGCA     50

BSNT_05540___     51 TCAGGTAAGCTTGGAAAATGAAAACGCACTGCGGCAGGCGCAGCTGGACG    100
                     ||||||||||||||||||||||||||||||||||||||||||||.|||||
BSU36290___yw     51 TCAGGTAAGCTTGGAAAATGAAAACGCACTGCGGCAGGCGCAGCGGGACG    100

BSNT_05540___    101 GCATTGAAGTGGTGGTGTCAACTGGGCGCGCTCATTTTGACGTCATGTCA    150
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU36290___yw    101 GCATTGAAGTGGTGGTGTCAACTGGGCGCGCTCATTTTGACGTCATGTCA    150

BSNT_05540___    151 ATCTTTGAACCGCTGGGGATCAAAACATGGGTCATCAGTGCAAACGGCGC    200
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU36290___yw    151 ATCTTTGAACCGCTGGGGATCAAAACATGGGTCATCAGTGCAAACGGCGC    200

BSNT_05540___    201 CGTCATTCACGATCCCGACGGCAGGCTTTATCATCACGAAACGATTGATA    250
                     ||||||||||||||||||.|||||||||||||||||||||||||||||||
BSU36290___yw    201 CGTCATTCACGATCCCGAGGGCAGGCTTTATCATCACGAAACGATTGATA    250

BSNT_05540___    251 AGAAACGGGCGTATGACATTCTCTCATGGCTTGAGTCGGAAAACTATTAT    300
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU36290___yw    251 AGAAACGGGCGTATGACATTCTCTCATGGCTTGAGTCGGAAAACTATTAT    300

BSNT_05540___    301 TATGAGGTATTCACAGGTTCAGCGATTTATACGCCGCAAAACGGCAGAGA    350
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU36290___yw    301 TATGAGGTATTCACAGGTTCAGCGATTTATACGCCGCAAAACGGCAGAGA    350

BSNT_05540___    351 ACTTCTTGATGTTGAGCTGGACAGATTCAGAAGCGCAAACCCGGAAACAG    400
                     ||||||||||||||||||.||||||||||||||||||||.||||||.|.|
BSU36290___yw    351 ACTTCTTGATGTTGAGCTCGACAGATTCAGAAGCGCAAATCCGGAAGCGG    400

BSNT_05540___    401 ATCTTTCTGTCCTTAAGCAGGCGGCCGAGGTGCAATACAGCCAATCGGGC    450
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU36290___yw    401 ATCTTTCTGTCCTTAAGCAGGCGGCCGAGGTGCAATACAGCCAATCGGGC    450

BSNT_05540___    451 TTTGCTTACATTAACTCCTTTCAAGAGCTGTTTGAAGCCGATCAGCCAAT    500
                     ||||||||||||||||||||||||||||||||||||||||||.|||||||
BSU36290___yw    451 TTTGCTTACATTAACTCCTTTCAAGAGCTGTTTGAAGCCGATGAGCCAAT    500

BSNT_05540___    501 CGATTTTTACAATATTCTCGGCTTTTCTTTCTTCAAAGAAAAGCTTGAGG    550
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU36290___yw    501 CGATTTTTACAATATTCTCGGCTTTTCTTTCTTCAAAGAAAAGCTTGAGG    550

BSNT_05540___    551 CAGGCTGGAAAAGATATGAGCATGCCGAAGATTTGACGCTTGTCAGTTCG    600
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU36290___yw    551 CAGGCTGGAAAAGATATGAGCATGCCGAAGATTTGACGCTTGTCAGTTCG    600

BSNT_05540___    601 GCTGAGCACAACTTTGAGCTTTCTTCCCGCAAAGCTTCCAAGGGGCAGGC    650
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU36290___yw    601 GCTGAGCACAACTTTGAGCTTTCTTCCCGCAAAGCTTCCAAGGGGCAGGC    650

BSNT_05540___    651 GCTGAAGAGGCTTGCAAAACAGCTGAATATTCCGCTCGAGGAAACCGCTG    700
                     |||||||||||||||||||||||||||||||||||||||||||||.||||
BSU36290___yw    651 GCTGAAGAGGCTTGCAAAACAGCTGAATATTCCGCTCGAGGAAACTGCTG    700

BSNT_05540___    701 CTGTAGGTGACAGTTTAAATGACAAATCGATGCTGGAGGCTGCGGGAAAA    750
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU36290___yw    701 CTGTAGGTGACAGTTTAAATGACAAATCGATGCTGGAGGCTGCGGGAAAA    750

BSNT_05540___    751 GGTGTAGCGATGGGCAATGCCCGGGAAGATATCAAATCGATAGCCGATGC    800
                     |||||||||||||||||||||||||||||.||||||||||||||||||||
BSU36290___yw    751 GGTGTAGCGATGGGCAATGCCCGGGAAGACATCAAATCGATAGCCGATGC    800

BSNT_05540___    801 GGTCACCTTAACCAATGACGAACATGGTGTCGCACATATGATGAAACATT    850
                     .|||||||||||||||||||||||.|||||||||||||||||||||||||
BSU36290___yw    801 TGTCACCTTAACCAATGACGAACACGGTGTCGCACATATGATGAAACATT    850

BSNT_05540___    851 TGATGTAG    858
                     ||.||||.
BSU36290___yw    851 TGTTGTAA    858


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