Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

Home

About

Browser

Genes

Download

Publications

DNA alignment: BSNT_05535 and BSU36269

See Amino acid alignment / Visit BSNT_05535 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:26:30
# Commandline: needle
#    -asequence dna-align/BSNT_05535.1.22522.seq
#    -bsequence dna-align/BSU36269___ywzD.2.22522.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_05535-BSU36269___ywzD.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_05535-BSU36269___ywzD.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05535
# 2: BSU36269___ywzD
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 168
# Identity:     144/168 (85.7%)
# Similarity:   144/168 (85.7%)
# Gaps:          24/168 (14.3%)
# Score: 720.0
# 
#
#=======================================

BSNT_05535         1 ATGGAAGCTGAAAGGAAAAAAAAGATGAGTGAAAAGAAATTGAATCAAGA     50
                                             ||||||||||||||||||||||||||
BSU36269___yw      1 ------------------------ATGAGTGAAAAGAAATTGAATCAAGA     26

BSNT_05535        51 AGAATTTCTGAAAATTTTGATGCATGCACATGAAATTGGTGAGCAGTCAT    100
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU36269___yw     27 AGAATTTCTGAAAATTTTGATGCATGCACATGAAATTGGTGAGCAGTCAT     76

BSNT_05535       101 CTGAGATGACGACGAAGGAAATGCTTGAAAATTTGATTTCTCATATTAAA    150
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU36269___yw     77 CTGAGATGACGACGAAGGAAATGCTTGAAAATTTGATTTCTCATATTAAA    126

BSNT_05535       151 AATGGATATGCAACATAA    168
                     ||||||||||||||||||
BSU36269___yw    127 AATGGATATGCAACATAA    144


#---------------------------------------
#---------------------------------------

Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.