Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

Home About Browser Genes Download Publications

DNA alignment: BSNT_05527 and BSU36220

See Amino acid alignment / Visit BSNT_05527 in genome browser / Return to Orthologue table
########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:26:29
# Commandline: needle
#    -asequence dna-align/BSNT_05527.1.22522.seq
#    -bsequence dna-align/BSU36220___ywqG.2.22522.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_05527-BSU36220___ywqG.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_05527-BSU36220___ywqG.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05527
# 2: BSU36220___ywqG
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 786
# Identity:     455/786 (57.9%)
# Similarity:   455/786 (57.9%)
# Gaps:         324/786 (41.2%)
# Score: 2247.0
# 
#
#=======================================

BSNT_05527         0 --------------------------------------------------      0
                                                                       
BSU36220___yw      1 ATGAATCATCTGCCCGAAAAAATGAGACCGTACCGCGACTTGCTGGAGAA     50

BSNT_05527         0 --------------------------------------------------      0
                                                                       
BSU36220___yw     51 ATCAGCGAAAGAATACGTGAAACTGAATGTGAGAAAGGGGAAAACAGGAC    100

BSNT_05527         0 --------------------------------------------------      0
                                                                       
BSU36220___yw    101 GATATGACAGCAAAATTGCCGGTGATCCCTATTTCCCCAAGCATGAAACA    150

BSNT_05527         0 --------------------------------------------------      0
                                                                       
BSU36220___yw    151 TATCCGACTGACGAAAATGGACAGCCGATGAAACTTCTGGCGCAGATTAA    200

BSNT_05527         0 --------------------------------------------------      0
                                                                       
BSU36220___yw    201 TTTCTCGCACATTCCCCAGCTTGACGGCTACCCTTCTTCAGGTATCCTGC    250

BSNT_05527         0 --------------------------------------------------      0
                                                                       
BSU36220___yw    251 AGTTCTACATTTCTGTTCATGATGACGTCTATGGATTGAATTTTGACGAT    300

BSNT_05527         1 ------------------------GTGATCTATTTTGAAAATATCATAGA     26
                                             |||||||||||||||||||||.||||
BSU36220___yw    301 CGATGTGAACAAAAGAATTTCAGAGTGATCTATTTTGAAAATATCGTAGA    350

BSNT_05527        27 AAACGAAGACGAGCTTGTTTCTGATTTTTCATTTATTGGCACAGGCGAAT     76
                     ||||||.|||||||||||||||||||||||||||||||||||||||||||
BSU36220___yw    351 AAACGATGACGAGCTTGTTTCTGATTTTTCATTTATTGGCACAGGCGAAT    400

BSNT_05527        77 GTGATTTTCCGATTTTATCAGAAGCGGCAGTCGAGCCTGTGAAATCTTCG    126
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU36220___yw    401 GTGATTTTCCGATTTTATCAGAAGCGGCAGTCGAGCCTGTGAAATCTTCG    450

BSNT_05527       127 GAATGGGTGCTGCCTACAGATTTTCAATTTGAGCAGTATACGGGCATGGA    176
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU36220___yw    451 GAATGGGTGCTGCCTACAGATTTTCAATTTGAGCAGTATACGGGCATGGA    500

BSNT_05527       177 AACAATGGAGTTCTTTGGTCAGTTCGGCGAGGATGAAGAAGACATTTATA    226
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU36220___yw    501 AACAATGGAGTTCTTTGGTCAGTTCGGCGAGGATGAAGAAGACATTTATA    550

BSNT_05527       227 ATGAACTGGCTGAAAACGGATTTGGCCATAAAATCGGCGGATACGCTTCT    276
                     ||||||||||||||||||||||||||||||||||.|||||||||||||||
BSU36220___yw    551 ATGAACTGGCTGAAAACGGATTTGGCCATAAAATTGGCGGATACGCTTCT    600

BSNT_05527       277 TTTACCCAGCATGATCCACGGGAATACGCATATAAAGAACACACCATCAT    326
                     |||||||||||||||||.||||||||||||||||||||||||||||||||
BSU36220___yw    601 TTTACCCAGCATGATCCCCGGGAATACGCATATAAAGAACACACCATCAT    650

BSNT_05527       327 GCTTTTACAAATTGATTCAGACGATGATATCGATTCAATGTGGGGAGACG    376
                     |||.||||||||||||||||||||||||||||||||||||||||||||||
BSU36220___yw    651 GCTGTTACAAATTGATTCAGACGATGATATCGATTCAATGTGGGGAGACG    700

BSNT_05527       377 TCGGCATCGCCAATTTTTTCATCACACCTGACGATCTAAGGAAAAAAGAC    426
                     |||||||||||||||||||||||||||||||.||||||||||||||||||
BSU36220___yw    701 TCGGCATCGCCAATTTTTTCATCACACCTGAAGATCTAAGGAAAAAAGAC    750

BSNT_05527       427 TTTTCAAACGTTCTGTATAACTGGGACTGCAGCTAA    462
                     |||||||||||||||||.||||||||||||||||||
BSU36220___yw    751 TTTTCAAACGTTCTGTACAACTGGGACTGCAGCTAA    786


#---------------------------------------
#---------------------------------------
Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.