Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_05524 and BSU36210
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:26:29
# Commandline: needle
# -asequence dna-align/BSNT_05524___ywqH.1.22522.seq
# -bsequence dna-align/BSU36210___ywqH.2.22522.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_05524___ywqH-BSU36210___ywqH.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_05524___ywqH-BSU36210___ywqH.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05524___ywqH
# 2: BSU36210___ywqH
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 434
# Identity: 382/434 (88.0%)
# Similarity: 382/434 (88.0%)
# Gaps: 22/434 ( 5.1%)
# Score: 1693.5
#
#
#=======================================
BSNT_05524___ 1 ATGGGTTATGAAAGTATGCTAGCGGATATCAAAAGTTCGCTCAACGGAAA 50
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU36210___yw 1 ATGGGTTATGAAAGTATGCTAGCGGATATCAAAAGTTCGCTCAACGGAAA 50
BSNT_05524___ 51 AATTTCCGACGTGGAAGACAAGATCGAAAAGCTGAAAAAAGCAAAAAAGG 100
||||||.|||||||||||||||||||||||||||||||||||||||||||
BSU36210___yw 51 AATTTCAGACGTGGAAGACAAGATCGAAAAGCTGAAAAAAGCAAAAAAGG 100
BSNT_05524___ 101 ACATAGACACACTGCAAGAAGAGGCAATCACTGAAATCAAAGAAATTGTG 150
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU36210___yw 101 ACATAGACACACTGCAAGAAGAGGCAATCACTGAAATCAAAGAAATTGTG 150
BSNT_05524___ 151 AAACCGGAATTGGGCAAGCATTGGACGGGAACAAAAGCCGATGATTTCGA 200
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU36210___yw 151 AAACCGGAATTGGGCAAGCATTGGACGGGAACAAAAGCCGATGATTTCGA 200
BSNT_05524___ 201 CAAGGGAAGAGAAGAGGCGAAATCGGAAGCATCCAAGATTGTGAATGATA 250
|||||||||||||||||||||||||||||||||.||||||||||||||||
BSU36210___yw 201 CAAGGGAAGAGAAGAGGCGAAATCGGAAGCATCTAAGATTGTGAATGATA 250
BSNT_05524___ 251 AATATAACGAGTATATGGCTTCGATTCAAAGCAAAATATTCTG-GCTTGA 299
||||||||||||||||||||||||||.|..|.||||| ||.|| .|||||
BSU36210___yw 251 AATATAACGAGTATATGGCTTCGATTAACGGGAAAAT-TTTTGATCTTGA 299
BSNT_05524___ 300 ----GACAGAG--AAATTTG-AGCTGAATTTGACAAAAAGTGC--AGCGA 340
||.|.|| ||||.|| |.|.||||| ||.| |||.|
BSU36210___yw 300 ATGGGATAAAGCTAAATATGCATCGGAATT---------GTTCATAGCAA 340
BSNT_05524___ 341 ATGCCGCAGGCGACCTTCTTGCTAAAGGAGAAGATTTCGTAGAAGAAGCA 390
|||..||||..||.||||||...||.||||||||.||||..|||||||..
BSU36210___yw 341 ATGGTGCAGCAGATCTTCTTAAAAAGGGAGAAGAGTTCGCGGAAGAAGTC 390
BSNT_05524___ 391 GGAAGACA-AATTAGTAAACTAAAATGGTGGTGA 423
|||| |.| |||||||||||||||||||||||||
BSU36210___yw 391 GGAA-ATACAATTAGTAAACTAAAATGGTGGTGA 423
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