Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_05516 and BSU36160

See Amino acid alignment / Visit BSNT_05516 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:26:28
# Commandline: needle
#    -asequence dna-align/BSNT_05516___ywqM.1.22522.seq
#    -bsequence dna-align/BSU36160___ywqM.2.22522.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_05516___ywqM-BSU36160___ywqM.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_05516___ywqM-BSU36160___ywqM.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05516___ywqM
# 2: BSU36160___ywqM
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 882
# Identity:     876/882 (99.3%)
# Similarity:   876/882 (99.3%)
# Gaps:           0/882 ( 0.0%)
# Score: 4356.0
# 
#
#=======================================

BSNT_05516___      1 GTGGAATTGAAGCAGCTGATCACCTTTATTACGGCGGCAGAACATGTAAA     50
                     ||||||||||||||||||||||||||||||||||||||.|||||||||||
BSU36160___yw      1 GTGGAATTGAAGCAGCTGATCACCTTTATTACGGCGGCTGAACATGTAAA     50

BSNT_05516___     51 CTTCACCCTAACCGCCAAAATGCTTAATTATGCACAATCAAGCGTTACCT    100
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU36160___yw     51 CTTCACCCTAACCGCCAAAATGCTTAATTATGCACAATCAAGCGTTACCT    100

BSNT_05516___    101 CTCAGATCAAATCACTTGAAGAAGAAATTGGGACGCCTTTATTTGAACGG    150
                     ||||||||||||||||||||||||||||.||.||||||||||||||||||
BSU36160___yw    101 CTCAGATCAAATCACTTGAAGAAGAAATCGGAACGCCTTTATTTGAACGG    150

BSNT_05516___    151 CTCGGCAAGCGGCTTATCTTGACAGAAGCAGGAAAAACGTTCAAATCTTA    200
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU36160___yw    151 CTCGGCAAGCGGCTTATCTTGACAGAAGCAGGAAAAACGTTCAAATCTTA    200

BSNT_05516___    201 TGCGCAGAAGATCATTGCGTTAACAGAAGAAGCGAAAATGGCCGCAAATC    250
                     |||.|||||||||||||||||||||||||||||||||||||||.||||||
BSU36160___yw    201 TGCACAGAAGATCATTGCGTTAACAGAAGAAGCGAAAATGGCCACAAATC    250

BSNT_05516___    251 AAGTAAGAGAAACAACCGGAACCTTAAAAATCGGGGCGACGGAAAGCCAG    300
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU36160___yw    251 AAGTAAGAGAAACAACCGGAACCTTAAAAATCGGGGCGACGGAAAGCCAG    300

BSNT_05516___    301 TGCACATACCGCCTGCCCCCTATCATAAAAGAATTTAAACAGGCTTTTCC    350
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU36160___yw    301 TGCACATACCGCCTGCCCCCTATCATAAAAGAATTTAAACAGGCTTTTCC    350

BSNT_05516___    351 CCAAGTAAAGCTCATATTCAAACCATATATCTCCAATGAACAAGCGAAAG    400
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU36160___yw    351 CCAAGTAAAGCTCATATTCAAACCATATATCTCCAATGAACAAGCGAAAG    400

BSNT_05516___    401 AACAGCTCTTACAGGGCCAGCTTGATATCACCTTCATCTTGGATGTAAAC    450
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU36160___yw    401 AACAGCTCTTACAGGGCCAGCTTGATATCACCTTCATCTTGGATGTAAAC    450

BSNT_05516___    451 CGGATGGAAGACGCACTGCACGTTGAATCTTTGATTCAGGATGAGATCAA    500
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU36160___yw    451 CGGATGGAAGACGCACTGCACGTTGAATCTTTGATTCAGGATGAGATCAA    500

BSNT_05516___    501 AATGGTGGCTGCTAATGACCATCCTTTTCCTGCGGATTTACCAGTAACAT    550
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU36160___yw    501 AATGGTGGCTGCTAATGACCATCCTTTTCCTGCGGATTTACCAGTAACAT    550

BSNT_05516___    551 TGAAGGATCTTCAAAACGAAACTCTTCTGCTGACAGAGGACGGCTGCTCG    600
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU36160___yw    551 TGAAGGATCTTCAAAACGAAACTCTTCTGCTGACAGAGGACGGCTGCTCG    600

BSNT_05516___    601 TACCGCACGCTCTTTGAGAACAATTTGCATGACTCCGGTGTCTATCCTAA    650
                     |||||||||||||||||||||||||||||||||||||||.||||||||||
BSU36160___yw    601 TACCGCACGCTCTTTGAGAACAATTTGCATGACTCCGGTATCTATCCTAA    650

BSNT_05516___    651 CAAATTGGAATTCGTCAGCATAGAAGCCATCAAACAATGCGTGATGGCCG    700
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU36160___yw    651 CAAATTGGAATTCGTCAGCATAGAAGCCATCAAACAATGCGTGATGGCCG    700

BSNT_05516___    701 GACTTGGGATTGGAATCTTGCCTGAAATGACAGTAAAAGATGATATTGCA    750
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU36160___yw    701 GACTTGGGATTGGAATCTTGCCTGAAATGACAGTAAAAGATGATATTGCA    750

BSNT_05516___    751 GCAGGCCGGATGAAAGAACTCAATTGGCAGAGCGATTGCCCCGTTTTCAC    800
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU36160___yw    751 GCAGGCCGGATGAAAGAACTCAATTGGCAGAGCGATTGCCCCGTTTTCAC    800

BSNT_05516___    801 TCAATTAGCATGGCATAAGGACAAGTGGATGTCTGCGCCATTAAAGGCTT    850
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU36160___yw    801 TCAATTAGCATGGCATAAGGACAAGTGGATGTCTGCGCCATTAAAGGCTT    850

BSNT_05516___    851 TTATCGATTTGACACGGAAAACATTCAAATAA    882
                     ||||||||||||||||||||||||||||||||
BSU36160___yw    851 TTATCGATTTGACACGGAAAACATTCAAATAA    882


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