Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_05486 and BSU36000

See Amino acid alignment / Visit BSNT_05486 in genome browser / Return to Orthologue table
########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:26:25
# Commandline: needle
#    -asequence dna-align/BSNT_05486___alsD.1.22522.seq
#    -bsequence dna-align/BSU36000___alsD.2.22522.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_05486___alsD-BSU36000___alsD.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_05486___alsD-BSU36000___alsD.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05486___alsD
# 2: BSU36000___alsD
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 768
# Identity:     755/768 (98.3%)
# Similarity:   755/768 (98.3%)
# Gaps:           0/768 ( 0.0%)
# Score: 3723.0
# 
#
#=======================================

BSNT_05486___      1 ATGAAACGAGAAAGCAACATTCAAGTGCTCAGACGCGGTCAAAAAGATCA     50
                     ||||||||||||||||||||||||||||||||.||.||||||||||||||
BSU36000___al      1 ATGAAACGAGAAAGCAACATTCAAGTGCTCAGCCGTGGTCAAAAAGATCA     50

BSNT_05486___     51 GCCTGTGAGCCAGATTTATCAAGTATCAACAATGACTTCTCTATTAGACG    100
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU36000___al     51 GCCTGTGAGCCAGATTTATCAAGTATCAACAATGACTTCTCTATTAGACG    100

BSNT_05486___    101 GAGTATATGACGGAGATTTTGAACTGTCAGAGATTCCGAAATATGGAGAC    150
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU36000___al    101 GAGTATATGACGGAGATTTTGAACTGTCAGAGATTCCGAAATATGGAGAC    150

BSNT_05486___    151 TTCGGTATCGGAACCTTTAACAAGCTTGACGGAGAGCTGATTGGGTTTGA    200
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU36000___al    151 TTCGGTATCGGAACCTTTAACAAGCTTGACGGAGAGCTGATTGGGTTTGA    200

BSNT_05486___    201 CGGCGAATTTTACCGTCTCCGTTCAGACGGAACCGCGACACCGGTCCAAA    250
                     ||||||||||||||||||.||.||||||||||||||||||||||||||||
BSU36000___al    201 CGGCGAATTTTACCGTCTTCGCTCAGACGGAACCGCGACACCGGTCCAAA    250

BSNT_05486___    251 ACGGGGATCGTTCTCCGTTCTGTTCATTTACGTTCTTTACACCGGACATG    300
                     |.||.||.|||||.||||||||||||||||||||||||||||||||||||
BSU36000___al    251 ATGGAGACCGTTCACCGTTCTGTTCATTTACGTTCTTTACACCGGACATG    300

BSNT_05486___    301 ACGCACAAAATTGATGCGAAAATGACACGCGAAGACTTTGAAAAAGAGAT    350
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU36000___al    301 ACGCACAAAATTGATGCGAAAATGACACGCGAAGACTTTGAAAAAGAGAT    350

BSNT_05486___    351 CAACAGCATGCTGCCAAGCAGAAACTTATTTTATGCAATTCGTATTGACG    400
                     ||||||||||||||||||||||||||||||||||||||||||.|||||||
BSU36000___al    351 CAACAGCATGCTGCCAAGCAGAAACTTATTTTATGCAATTCGCATTGACG    400

BSNT_05486___    401 GATTGTTTAAAAAGGTGCAGACAAGAACGGTAGAACTTCAAGAAAAACCT    450
                     ||||||||||||||||||||||||||||.|||||||||||||||||||||
BSU36000___al    401 GATTGTTTAAAAAGGTGCAGACAAGAACAGTAGAACTTCAAGAAAAACCT    450

BSNT_05486___    451 TACGTGCCAATGGTTGAAGCGGTCAAAACACAGCCGATTTTCAACTTCGA    500
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU36000___al    451 TACGTGCCAATGGTTGAAGCGGTCAAAACACAGCCGATTTTCAACTTCGA    500

BSNT_05486___    501 CAACGTGAGAGGAACAATCGTAGGTTTCTTGACACCAGCTTATGCAAACG    550
                     |||||||||||||||.||.|||||||||||||||||||||||||||||||
BSU36000___al    501 CAACGTGAGAGGAACGATTGTAGGTTTCTTGACACCAGCTTATGCAAACG    550

BSNT_05486___    551 GAATCGCCGTTTCAGGCTATCACCTGCACTTCATTGACGAAGGACGCAAT    600
                     |||||||||||||.||||||||||||||||||||||||||||||||||||
BSU36000___al    551 GAATCGCCGTTTCTGGCTATCACCTGCACTTCATTGACGAAGGACGCAAT    600

BSNT_05486___    601 TCAGGCGGACACGTTTTTGACTATGTGCTTGAGGATTGCACGGTTACGAT    650
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU36000___al    601 TCAGGCGGACACGTTTTTGACTATGTGCTTGAGGATTGCACGGTTACGAT    650

BSNT_05486___    651 TTCTCAAAAAATGAACATGAATCTCAGACTTCCGAACACAGCGGATTTCT    700
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU36000___al    651 TTCTCAAAAAATGAACATGAATCTCAGACTTCCGAACACAGCGGATTTCT    700

BSNT_05486___    701 TTAATGCGAATCTGGATAACCCTGATTTTGCGAAAGATATCGAAACAACT    750
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU36000___al    701 TTAATGCGAATCTGGATAACCCTGATTTTGCGAAAGATATCGAAACAACT    750

BSNT_05486___    751 GAAGGAAGCCCTGAATAA    768
                     ||||||||||||||||||
BSU36000___al    751 GAAGGAAGCCCTGAATAA    768


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