Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_05481 and BSU35960
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:26:25
# Commandline: needle
# -asequence dna-align/BSNT_05481___rbsB.1.22522.seq
# -bsequence dna-align/BSU35960___rbsB.2.22522.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_05481___rbsB-BSU35960___rbsB.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_05481___rbsB-BSU35960___rbsB.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05481___rbsB
# 2: BSU35960___rbsB
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 918
# Identity: 898/918 (97.8%)
# Similarity: 898/918 (97.8%)
# Gaps: 0/918 ( 0.0%)
# Score: 4410.0
#
#
#=======================================
BSNT_05481___ 1 ATGAAAAAGGCAGTATCCGTCATTTTAACGTTATCATTATTTTTGTTAAC 50
|||||||||||.||||||||||||||||||||||||||||||||||||||
BSU35960___rb 1 ATGAAAAAGGCTGTATCCGTCATTTTAACGTTATCATTATTTTTGTTAAC 50
BSNT_05481___ 51 CGCCTGTTCGCTTGAGCCTCCCCAATGGGCAAAGCCTTCAAACTCGGGGA 100
||||||||||||||||||||||||||||||||||||.|||||||||||||
BSU35960___rb 51 CGCCTGTTCGCTTGAGCCTCCCCAATGGGCAAAGCCATCAAACTCGGGGA 100
BSNT_05481___ 101 ACAAAAAGGATTTCACCATCGGCTTGTCCGTCTCAACGCTTAATAATCCT 150
||||||||||.||||||||.||||||||||||||||||||||||||||||
BSU35960___rb 101 ACAAAAAGGAATTCACCATTGGCTTGTCCGTCTCAACGCTTAATAATCCT 150
BSNT_05481___ 151 TTTTTTGTCTCATTAAAAAAGGGTATCGAAAAAGAAGCTGAAAAACGGGG 200
|||||||||||||||||||||||||||||||||||||||.||||||||||
BSU35960___rb 151 TTTTTTGTCTCATTAAAAAAGGGTATCGAAAAAGAAGCTAAAAAACGGGG 200
BSNT_05481___ 201 AATGAAAGTGATCATTGTTGATGCACAAAATGATTCATCGAAACAGACGA 250
|||||||||.||||||||||||||||||||||||||||||||||||||||
BSU35960___rb 201 AATGAAAGTCATCATTGTTGATGCACAAAATGATTCATCGAAACAGACGA 250
BSNT_05481___ 251 GTGACGTGGAAGATTTAATTCAGCAAGGTGTTGATGCATTATTAATCAAC 300
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU35960___rb 251 GTGACGTGGAAGATTTAATTCAGCAAGGTGTTGATGCATTATTAATCAAC 300
BSNT_05481___ 301 CCGACTGATTCTTCGGCGATCTCAACGGCAGTAGAATCTGCAAACGCAGT 350
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU35960___rb 301 CCGACTGATTCTTCGGCGATCTCAACGGCAGTAGAATCTGCAAACGCAGT 350
BSNT_05481___ 351 CGGTGTGCCCGTCGTAACAATCGATCGATCTGCCGAACAAGGAAAAGTTG 400
|||||||||||||||||||||||||||||||||.||||||||||||||||
BSU35960___rb 351 CGGTGTGCCCGTCGTAACAATCGATCGATCTGCGGAACAAGGAAAAGTTG 400
BSNT_05481___ 401 AAACTCTCGTTGCTTCCGATAATGTAAAAGGCGGTGAAATGGCCGCGGCG 450
||||.|||||||||||||||||||||||||||||||||||||||||||||
BSU35960___rb 401 AAACCCTCGTTGCTTCCGATAATGTAAAAGGCGGTGAAATGGCCGCGGCG 450
BSNT_05481___ 451 TTTATTGCCGATAAACTTGGAAAAGGAGCAAAGGTGGCAGAGCTTGAAGG 500
|||||||||||.||||||||||||||||||||||||||||||||||||||
BSU35960___rb 451 TTTATTGCCGACAAACTTGGAAAAGGAGCAAAGGTGGCAGAGCTTGAAGG 500
BSNT_05481___ 501 CGTCCCCGGCGCATCTGCCACACGGGAACGCGGCTCAGGATTTCATAACA 550
||||||||||||||||||||||||||||||||||||||||||.|||||||
BSU35960___rb 501 CGTCCCCGGCGCATCTGCCACACGGGAACGCGGCTCAGGATTCCATAACA 550
BSNT_05481___ 551 TCGCAGACCAAAAGCTCCATGTTGTCACAAAACAATCAGCTGACTTTGAC 600
|||||||||||||||||||.||||||||||||||||||||||||||||||
BSU35960___rb 551 TCGCAGACCAAAAGCTCCAAGTTGTCACAAAACAATCAGCTGACTTTGAC 600
BSNT_05481___ 601 CGCACGAAAGGCCTGACTGTCATGGAAAACCTGCTGCAGGGACATCCTGA 650
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU35960___rb 601 CGCACGAAAGGCCTGACTGTCATGGAAAACCTGCTGCAGGGACATCCTGA 650
BSNT_05481___ 651 TATCCAAGCTGTTTTTGCTCACAACGATGAAATGGCGCTCGGTGCTCTCG 700
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU35960___rb 651 TATCCAAGCTGTTTTTGCTCACAACGATGAAATGGCGCTCGGTGCTCTCG 700
BSNT_05481___ 701 AAGCAATTAACAGCTCGGGAAAAGACATATTGGTAATCGGCTTTGACGGC 750
|.|||||||||||||||||.||||||||||||||.|||||.|||||||||
BSU35960___rb 701 AGGCAATTAACAGCTCGGGGAAAGACATATTGGTGATCGGTTTTGACGGC 750
BSNT_05481___ 751 AATAAAGACGCGCTCGCTTCCATTAAAGACGGAAAGCTGTCAGCCACCGT 800
||||||||.|||||||||||||||||||||.|||||||||||||||||||
BSU35960___rb 751 AATAAAGATGCGCTCGCTTCCATTAAAGACAGAAAGCTGTCAGCCACCGT 800
BSNT_05481___ 801 AGCTCAGCAGCCTGAATTAATCGGTAAACTGGCTACAGAAGCAGCAGATG 850
.|||||||||||||||||||||||||||.|||||||||||||||||||||
BSU35960___rb 801 CGCTCAGCAGCCTGAATTAATCGGTAAATTGGCTACAGAAGCAGCAGATG 850
BSNT_05481___ 851 ATATTTTGCACGGAAAAAAAGTGCAAAAAACAATATCCGCGCCTCTCAAA 900
|||||||||||||.||||||||||||||||||||||||||||||||||||
BSU35960___rb 851 ATATTTTGCACGGGAAAAAAGTGCAAAAAACAATATCCGCGCCTCTCAAA 900
BSNT_05481___ 901 CTAGAAACACAAAAATAA 918
||||||||||||||||||
BSU35960___rb 901 CTAGAAACACAAAAATAA 918
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