Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_05479 and BSU35940
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:26:24
# Commandline: needle
# -asequence dna-align/BSNT_05479___rbsA.1.22522.seq
# -bsequence dna-align/BSU35940___rbsA.2.22522.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_05479___rbsA-BSU35940___rbsA.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_05479___rbsA-BSU35940___rbsA.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05479___rbsA
# 2: BSU35940___rbsA
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1482
# Identity: 1441/1482 (97.2%)
# Similarity: 1441/1482 (97.2%)
# Gaps: 0/1482 ( 0.0%)
# Score: 7041.0
#
#
#=======================================
BSNT_05479___ 1 ATGCAGATTGAAATGAAAGACATTCATAAAGCATTCGGAAAAAACCAGGT 50
||||||||||||||||||||||||||||||.|||||||||||||.|||||
BSU35940___rb 1 ATGCAGATTGAAATGAAAGACATTCATAAAACATTCGGAAAAAATCAGGT 50
BSNT_05479___ 51 GCTATCAGGCGTTTCTTTTCAGCTCTTACCTGGCGAGGTTCACGCGTTAA 100
|||.|||||||||||.|||||||||.|.|||||||||||||||||.||||
BSU35940___rb 51 GCTGTCAGGCGTTTCCTTTCAGCTCATGCCTGGCGAGGTTCACGCATTAA 100
BSNT_05479___ 101 TGGGAGAAAACGGCGCCGGCAAGTCCACGCTTATGAACATTCTGACAGGC 150
|||||||||||||||||||||||||||||||||||||||||.||||||||
BSU35940___rb 101 TGGGAGAAAACGGCGCCGGCAAGTCCACGCTTATGAACATTTTGACAGGC 150
BSNT_05479___ 151 CTGCACAAATCGGATCAAGGTCAAATCAGCATAAACGGAAACGAAACGTA 200
|||||||||.|.|||.||||||||||||||||||||||||||||||||||
BSU35940___rb 151 CTGCACAAAGCAGATAAAGGTCAAATCAGCATAAACGGAAACGAAACGTA 200
BSNT_05479___ 201 TTTTTCCAATCCGAAAGAAGCAGAACAGCATGGAATAGCCTTTATCCATC 250
|||||||||||||||||||||.||||||||||||||||||||||||||||
BSU35940___rb 201 TTTTTCCAATCCGAAAGAAGCGGAACAGCATGGAATAGCCTTTATCCATC 250
BSNT_05479___ 251 AGGAATTGAATATCTGGCCGGAAATGACTGTTCTGGAGAATCTATTTATC 300
||||||||||||||||||||||||||||.|||||.|||||||||||||||
BSU35940___rb 251 AGGAATTGAATATCTGGCCGGAAATGACCGTTCTTGAGAATCTATTTATC 300
BSNT_05479___ 301 GGTAAAGAGATATCCTCCAAGCTGGGCGTTTTACAAACAAGAAAAATGAA 350
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU35940___rb 301 GGTAAAGAGATATCCTCCAAGCTGGGCGTTTTACAAACAAGAAAAATGAA 350
BSNT_05479___ 351 AGCGCTAGCAAAAGAGCAATTTGACAAACTCTCTGTCTCTCTTTCTCTCG 400
||||||||||||||||||||||||||||||.||.||||||||||||||.|
BSU35940___rb 351 AGCGCTAGCAAAAGAGCAATTTGACAAACTTTCCGTCTCTCTTTCTCTTG 400
BSNT_05479___ 401 ATCAAGAAGCCGGCGAATGTTCTGTCGGACAGCAGCAAATGATCGAAATC 450
||||||||||||||||||||||.||||||||||||||||||||||||||.
BSU35940___rb 401 ATCAAGAAGCCGGCGAATGTTCCGTCGGACAGCAGCAAATGATCGAAATT 450
BSNT_05479___ 451 GCAAAAGCGCTTATGACAAATGCCGAGGTAATCATTATGGATGAACCGAC 500
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU35940___rb 451 GCAAAAGCGCTTATGACAAATGCCGAGGTAATCATTATGGATGAACCGAC 500
BSNT_05479___ 501 CGCAGCGTTGACTGAACGTGAAATCAGCAAGCTCTTTGAGGTCATTACAG 550
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU35940___rb 501 CGCAGCGTTGACTGAACGTGAAATCAGCAAGCTCTTTGAGGTCATTACAG 550
BSNT_05479___ 551 CGTTAAAAAAGAACGGCGTCTCCATTGTCTATATTTCGCATCGCATGGAA 600
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU35940___rb 551 CGTTAAAAAAGAACGGCGTCTCCATTGTCTATATTTCGCATCGCATGGAA 600
BSNT_05479___ 601 GAAATTTTTGCGATTTGCGACAGAATTACCATCATGCGTGACGGAAAAAC 650
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU35940___rb 601 GAAATTTTTGCGATTTGCGACAGAATTACCATCATGCGTGACGGAAAAAC 650
BSNT_05479___ 651 GGTGGATACAACAAACATCTCAGAAACTGATTTTGATGACGTCGTCAAAA 700
|||.|||||||||||||||||||||||||||||||||||.||||||||||
BSU35940___rb 651 GGTAGATACAACAAACATCTCAGAAACTGATTTTGATGAAGTCGTCAAAA 700
BSNT_05479___ 701 AAATGGTCGGACGGGAGCTGACTGAACGATATCCAAAACGCACTCCTTCT 750
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU35940___rb 701 AAATGGTCGGACGGGAGCTGACTGAACGATATCCAAAACGCACTCCTTCT 750
BSNT_05479___ 751 CTCGGTGACAAAGTATTCGAGGTGAAAAATGCCTCTGTAAAAGGGAGTTT 800
||||||||||||||||||||||||||||||||.||.||||||||||||||
BSU35940___rb 751 CTCGGTGACAAAGTATTCGAGGTGAAAAATGCTTCCGTAAAAGGGAGTTT 800
BSNT_05479___ 801 TGAAGATGTCAGCTTTTATGTTCGGTCCGGTGAAATCGTCGGTGTTTCAG 850
|||.||.||||||||||||||.||.||||||||.||||||||||||||||
BSU35940___rb 801 TGAGGACGTCAGCTTTTATGTGCGTTCCGGTGAGATCGTCGGTGTTTCAG 850
BSNT_05479___ 851 GATTGATGGGAGCCGGCCGTACAGAAATGATGAGAGCGCTGTTCGGCGTT 900
||||.||||||||||||||.||||||||||||||||||||||||||||||
BSU35940___rb 851 GATTAATGGGAGCCGGCCGGACAGAAATGATGAGAGCGCTGTTCGGCGTT 900
BSNT_05479___ 901 GACAGGCTGGACACGGGTGAGATATGGATCGCTGGGAAAAAAACGGCTAT 950
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU35940___rb 901 GACAGGCTGGACACGGGTGAGATATGGATCGCTGGGAAAAAAACGGCTAT 950
BSNT_05479___ 951 TAAGAACCCGCAGGAAGCCGTGAAAAAAGGTCTCGGCTTTATTACAGAGA 1000
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU35940___rb 951 TAAGAACCCGCAGGAAGCCGTGAAAAAAGGTCTCGGCTTTATTACAGAGA 1000
BSNT_05479___ 1001 ATCGCAAGGATGAAGGGCTCCTGCTCGACACCTCGATCCGCGAAAATATT 1050
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU35940___rb 1001 ATCGCAAGGATGAAGGGCTCCTGCTCGACACCTCGATCCGCGAAAATATT 1050
BSNT_05479___ 1051 GCCCTGCCCAATCTGTCCAGCTTCTCACCAAAGGGGCTCATTGATCACAA 1100
|||||||||||||||||||||||||||||||||||.|||||||||||.||
BSU35940___rb 1051 GCCCTGCCCAATCTGTCCAGCTTCTCACCAAAGGGTCTCATTGATCATAA 1100
BSNT_05479___ 1101 GCGGGAGGCTGAGTTTGTCGATCTGTTAATTAAACGCCTCACTATCAAAA 1150
||||||||||||.|||||||||||||||||.||.||||||||||||||||
BSU35940___rb 1101 GCGGGAGGCTGAATTTGTCGATCTGTTAATCAAGCGCCTCACTATCAAAA 1150
BSNT_05479___ 1151 CAGCATCACCGGAAACGCACGCACGCCATTTGTCAGGTGGAAACCAGCAA 1200
|||||||||||||||||||||||||||||||.|||||.||||||||||||
BSU35940___rb 1151 CAGCATCACCGGAAACGCACGCACGCCATTTATCAGGAGGAAACCAGCAA 1200
BSNT_05479___ 1201 AAAGTGGTGATAGCCAAGTGGATCGGCATCGGACTGAAAGTGCTTATCTT 1250
||||||||||||||||||||||||||||||||||.|||||||||||||||
BSU35940___rb 1201 AAAGTGGTGATAGCCAAGTGGATCGGCATCGGACCGAAAGTGCTTATCTT 1250
BSNT_05479___ 1251 GGATGAGCCAACCAGAGGTGTGGATGTTGGCGCCAAACGAGAGATTTATA 1300
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU35940___rb 1251 GGATGAGCCAACCAGAGGTGTGGATGTTGGCGCCAAACGAGAGATTTATA 1300
BSNT_05479___ 1301 CGCTGATGAATGAGCTGACCGAACGCGGCGTCGCTATCATCATGGTGTCA 1350
||||||||||||||||||||||||||||.|||||||||||||||||||||
BSU35940___rb 1301 CGCTGATGAATGAGCTGACCGAACGCGGTGTCGCTATCATCATGGTGTCA 1350
BSNT_05479___ 1351 TCAGAGCTGCCTGAAATTCTGGGAATGAGCGATCGGATTATCGTTGTCCA 1400
||||||||.|||||||||||||||||||||||||||||||||||||||||
BSU35940___rb 1351 TCAGAGCTTCCTGAAATTCTGGGAATGAGCGATCGGATTATCGTTGTCCA 1400
BSNT_05479___ 1401 TGAAGGCAGAATCAGCGGAGAAATCCATGCGCGAGAAGCAACACAAGAAC 1450
||||||||||||||||||.|||||||||||||||||||||||||||||||
BSU35940___rb 1401 TGAAGGCAGAATCAGCGGCGAAATCCATGCGCGAGAAGCAACACAAGAAC 1450
BSNT_05479___ 1451 GAATTATGACACTTGCCACGGGAGGGCGGTAA 1482
||||||||||||||||||||||||||||||||
BSU35940___rb 1451 GAATTATGACACTTGCCACGGGAGGGCGGTAA 1482
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