Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_05478 and BSU35930
See
Amino acid alignment /
Visit
BSNT_05478 in genome browser /
Return to
Orthologue table
########################################
# Program: needle
# Rundate: Mon 8 Mar 2010 06:26:24
# Commandline: needle
# -asequence dna-align/BSNT_05478___rbsD.1.22522.seq
# -bsequence dna-align/BSU35930___rbsD.2.22522.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_05478___rbsD-BSU35930___rbsD.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_05478___rbsD-BSU35930___rbsD.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05478___rbsD
# 2: BSU35930___rbsD
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 396
# Identity: 388/396 (98.0%)
# Similarity: 388/396 (98.0%)
# Gaps: 0/396 ( 0.0%)
# Score: 1908.0
#
#
#=======================================
BSNT_05478___ 1 ATGAAAAAACACGGTATACTGAACAGCCATCTTGCCAAGATTTTAGCAGA 50
|||||||||||||||||||||||||||||||||||||||||||||||.||
BSU35930___rb 1 ATGAAAAAACACGGTATACTGAACAGCCATCTTGCCAAGATTTTAGCCGA 50
BSNT_05478___ 51 CCTTGGCCACACTGATAAAATTGTCATCGCGGATGCCGGACTGCCGGTTC 100
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU35930___rb 51 CCTTGGCCACACTGATAAAATTGTCATCGCGGATGCCGGACTGCCGGTTC 100
BSNT_05478___ 101 CCGACGGCGTTTTGAAAATTGATCTTTCACTGAAGCCGGGCCTTCCGGCT 150
|.||||||||||||||||||||||||||||||||||||||||||||||||
BSU35930___rb 101 CTGACGGCGTTTTGAAAATTGATCTTTCACTGAAGCCGGGCCTTCCGGCT 150
BSNT_05478___ 151 TTCCAAGATACAGCGGCAGTACTGGCTGAGGAAATGGCGGTCGAAAAAGT 200
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU35930___rb 151 TTCCAAGATACAGCGGCAGTACTGGCTGAGGAAATGGCGGTCGAAAAAGT 200
BSNT_05478___ 201 CATTGCTGCAGCTGAAATAAAAGCATCCAATCAGGAGAATGCGAGATTTC 250
||||||||||||||||||||||||||||||||||||||||||||.|||||
BSU35930___rb 201 CATTGCTGCAGCTGAAATAAAAGCATCCAATCAGGAGAATGCGAAATTTC 250
BSNT_05478___ 251 TAGAAAATCTTTTCTCTGAACAAGAGATTGAATACCTTTCTCACGAGGAG 300
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU35930___rb 251 TAGAAAATCTTTTCTCTGAACAAGAGATTGAATACCTTTCTCACGAGGAG 300
BSNT_05478___ 301 TTTAAGCTGCTGACAAAAGAAGCAAAGGCAGTCATAAGAACAGGAGAATT 350
||||||||||||||||||||.|||||||||||||||||||||||||||||
BSU35930___rb 301 TTTAAGCTGCTGACAAAAGATGCAAAGGCAGTCATAAGAACAGGAGAATT 350
BSNT_05478___ 351 CACACAGTATGCCAACTGCATCCTGCAGGCGGGTGTGCTTTTCTAG 396
|||||..|||||||||||||||||||||||.|||||.|||||||||
BSU35930___rb 351 CACACCATATGCCAACTGCATCCTGCAGGCAGGTGTACTTTTCTAG 396
#---------------------------------------
#---------------------------------------
Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.