Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_05474 and BSU35910
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:26:24
# Commandline: needle
# -asequence dna-align/BSNT_05474___rbsR.1.22522.seq
# -bsequence dna-align/BSU35910___rbsR.2.22522.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_05474___rbsR-BSU35910___rbsR.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_05474___rbsR-BSU35910___rbsR.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05474___rbsR
# 2: BSU35910___rbsR
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 990
# Identity: 960/990 (97.0%)
# Similarity: 960/990 (97.0%)
# Gaps: 9/990 ( 0.9%)
# Score: 4716.0
#
#
#=======================================
BSNT_05474___ 1 TTGGCTACAATTAAAGATGTCGCCGGAGCGGCGGGCGTTTCAGTTGCGAC 50
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU35910___rb 1 TTGGCTACAATTAAAGATGTCGCCGGAGCGGCGGGCGTTTCAGTTGCGAC 50
BSNT_05474___ 51 GGTTTCCCGCGTCCTGAATGATAACGGCTATGTACACGAAGTAACGCGAA 100
||||||||||..|||||||||||||||||||||||||||||.||||||||
BSU35910___rb 51 GGTTTCCCGCAACCTGAATGATAACGGCTATGTACACGAAGAAACGCGAA 100
BSNT_05474___ 101 CGCGTGTCATAGCGGCGATGGCGAAGCTGAACTATTACCCGAATGAAGTT 150
|||||||||||||||||||||||||||||||||||||||||||||||||.
BSU35910___rb 101 CGCGTGTCATAGCGGCGATGGCGAAGCTGAACTATTACCCGAATGAAGTC 150
BSNT_05474___ 151 GCCAGATCTCTATATAAAAGAGAATCCCGACTGATCGGACTTTTGCTCCC 200
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU35910___rb 151 GCCAGATCTCTATATAAAAGAGAATCCCGACTGATCGGACTTTTGCTCCC 200
BSNT_05474___ 201 GGATATCACAAACCCTTTCTTCCCCCAGCTTGCCCGCGGTGCGGAGGATG 250
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU35910___rb 201 GGATATCACAAACCCTTTCTTCCCCCAGCTTGCCCGCGGTGCGGAGGATG 250
BSNT_05474___ 251 AATTGAACCGGGAAGGCTATCGCCTTATTTTCGGCAACAGTGACGAGGAA 300
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU35910___rb 251 AATTGAACCGGGAAGGCTATCGCCTTATTTTCGGCAACAGTGACGAGGAA 300
BSNT_05474___ 301 TTGAAAAAAGAACTTGAATACCTTCAAACCTTTAAGCAAAATCATGTCGC 350
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU35910___rb 301 TTGAAAAAAGAACTTGAATACCTTCAAACCTTTAAGCAAAATCATGTCGC 350
BSNT_05474___ 351 AGGCATTATTGCCGCAACGAATTACCCGGATCTCGAGGAATACAGCGGCA 400
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU35910___rb 351 AGGCATTATTGCCGCAACGAATTACCCGGATCTCGAGGAATACAGCGGCA 400
BSNT_05474___ 401 TGAATTATCCCGTTGTTTTTCTGGACAGAACACTGGAAGGGGCTCCTTCT 450
||||||||||.||||||||||||||||||||.||.|||||||||||||||
BSU35910___rb 401 TGAATTATCCAGTTGTTTTTCTGGACAGAACGCTTGAAGGGGCTCCTTCT 450
BSNT_05474___ 451 GTGTCCAGTGACGGCTATACAGGAGGAAAGTTAGCCGCTCAGGCTATCAT 500
|||||||||||||||||||||||||.||||||||||||.|||||||||||
BSU35910___rb 451 GTGTCCAGTGACGGCTATACAGGAGTAAAGTTAGCCGCCCAGGCTATCAT 500
BSNT_05474___ 501 TCACGGAAAAAGCCAGCGCATTACGCTCTTGAGAGGACCCGCTCACCTGC 550
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU35910___rb 501 TCACGGAAAAAGCCAGCGCATTACGCTCTTGAGAGGACCCGCTCACCTGC 550
BSNT_05474___ 551 CGACCGCTCAAGACCGCTTTAATGGCGCTTTGGAAATCTTAAAGCAGGCT 600
||||||||||||||||.|||||.|||||||||||||||||||||||||||
BSU35910___rb 551 CGACCGCTCAAGACCGATTTAACGGCGCTTTGGAAATCTTAAAGCAGGCT 600
BSNT_05474___ 601 GAAGTTGAGTTTCAGGTCATTGAGACCGCTTCATTTTCTATTAAAGATGC 650
||||||||.|||||||||||||||||.|||||||||||.|||||||||||
BSU35910___rb 601 GAAGTTGATTTTCAGGTCATTGAGACAGCTTCATTTTCAATTAAAGATGC 650
BSNT_05474___ 651 ACAATCGATGGCGAAGGAGCTGTTTGCCGCTTATCCAGCGACAGATGGTG 700
||||||||||||||||||||||||||||.|||||||||||||||||||||
BSU35910___rb 651 ACAATCGATGGCGAAGGAGCTGTTTGCCTCTTATCCAGCGACAGATGGTG 700
BSNT_05474___ 701 TAATCGCGAGTAATGATATTCAAGCCGCTGCCGTTTTACATGAAGCATTG 750
|.||||||||||||||||||||||||||||||||||||||||||||||||
BSU35910___rb 701 TGATCGCGAGTAATGATATTCAAGCCGCTGCCGTTTTACATGAAGCATTG 750
BSNT_05474___ 751 CGGCGCGGAAAAAACGTGCCGGAGGACATTCAAATTATCGGCTATGATGA 800
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU35910___rb 751 CGGCGCGGAAAAAACGTGCCGGAGGACATTCAAATTATCGGCTATGATGA 800
BSNT_05474___ 801 CATTCCGCAAAGCGGACTTCTGTTCCCGCCACTTTCTACAATTAAACAGC 850
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU35910___rb 801 CATTCCGCAAAGCGGACTTCTGTTCCCGCCACTTTCTACAATTAAACAGC 850
BSNT_05474___ 851 CCGCATATGATATGGGAAGAGAAGCTGCCAAACTGCTTTTGGGCATCATC 900
||||||||||||||||.|.||||||||||||||||||||||||.|||||.
BSU35910___rb 851 CCGCATATGATATGGGGAAAGAAGCTGCCAAACTGCTTTTGGGTATCATT 900
BSNT_05474___ 901 AAAAAACAGCCGCTGGCAGAAACGGCAATTCAAATGCCTGTCACCTATAT 950
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU35910___rb 901 AAAAAACAGCCGCTGGCAGAAACGGCAATTCAAATGCCTGTCACCTATAT 950
BSNT_05474___ 951 AGGAAGAAAGACGACAAGAAAGGAAGATTACGATGCGTAA 990
||||||||||||||||||||||||||||||.
BSU35910___rb 951 AGGAAGAAAGACGACAAGAAAGGAAGATTAA--------- 981
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