Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_05468 and BSU35860
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:26:23
# Commandline: needle
# -asequence dna-align/BSNT_05468___ywtD.1.22522.seq
# -bsequence dna-align/BSU35860___pgdS.2.22522.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_05468___ywtD-BSU35860___pgdS.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_05468___ywtD-BSU35860___pgdS.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05468___ywtD
# 2: BSU35860___pgdS
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1362
# Identity: 1228/1362 (90.2%)
# Similarity: 1228/1362 (90.2%)
# Gaps: 120/1362 ( 8.8%)
# Score: 6084.0
#
#
#=======================================
BSNT_05468___ 1 ATGAGACACTCTCTTTTTATTTGCCCAGCATATTCATTCTGTAAAAATAT 50
BSU35860___pg 0 -------------------------------------------------- 0
BSNT_05468___ 51 CAAAAAGTCTCTTAACATATTCAAAAAAATACCGATGTTAAAACTGCAAA 100
BSU35860___pg 0 -------------------------------------------------- 0
BSNT_05468___ 101 AAGAGGAGGAGATAATAAAAGTGAACACACTGGCAAACTGGAAGAAGTTT 150
||||||||||||||||||||||||||||||
BSU35860___pg 1 --------------------GTGAACACACTGGCAAACTGGAAGAAGTTT 30
BSNT_05468___ 151 TTGCTTGTGGCGGTTATCATTTGTTTTTTGGTTCCAATTATGACAAAAGC 200
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU35860___pg 31 TTGCTTGTGGCGGTTATCATTTGTTTTTTGGTTCCAATTATGACAAAAGC 80
BSNT_05468___ 201 GGAGATTGCGGAAGCTGATACATCATCAGAATTGATTGTCAGCGAAGCAA 250
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU35860___pg 81 GGAGATTGCGGAAGCTGATACATCATCAGAATTGATTGTCAGCGAAGCAA 130
BSNT_05468___ 251 AAAACCTGCTTGGATATCAGTATAAATATGGCGGGGAAACGCCGAAAGAG 300
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU35860___pg 131 AAAACCTGCTTGGATATCAGTATAAATATGGCGGGGAAACGCCGAAAGAG 180
BSNT_05468___ 301 GGTTTCGATCCATCAGGATTGATACAATATGTGTTCAGTAAGGCTGATAT 350
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU35860___pg 181 GGTTTCGATCCATCAGGATTGATACAATATGTGTTCAGTAAGGCTGATAT 230
BSNT_05468___ 351 TCATCTGCCGAGATCTGTAAACGACCAGTATAAAATCGGAACAGCTGTAA 400
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU35860___pg 231 TCATCTGCCGAGATCTGTAAACGACCAGTATAAAATCGGAACAGCTGTAA 280
BSNT_05468___ 401 AGCCGGAAAACCTGAAGCCGGGTGATATTTTGTTTTTCAAGAAAGAGGGA 450
|.||||||||||||||||||||||||||||||||||||||||||||||||
BSU35860___pg 281 AACCGGAAAACCTGAAGCCGGGTGATATTTTGTTTTTCAAGAAAGAGGGA 330
BSNT_05468___ 451 AGCAACGGCTCTGTTCCGACACATGACGCCCTTTATATCGGAGACGGCCA 500
||||.||||.||||||||||||||||||||||||||||||||||||||||
BSU35860___pg 331 AGCACCGGCACTGTTCCGACACATGACGCCCTTTATATCGGAGACGGCCA 380
BSNT_05468___ 501 AATGGTACACAGTACACAGTCAAAAGGGGTTATCATCACCAATTACAAAA 550
||||||.|||||||||||||||||||||||||||||||||||||||||||
BSU35860___pg 381 AATGGTTCACAGTACACAGTCAAAAGGGGTTATCATCACCAATTACAAAA 430
BSNT_05468___ 551 AAAGCAGCTATTGGAGCGGAACTTATATCGGAGCGAGACGAATCGCTGCC 600
|||||||||||||||||||||||||||||||.||||||||||||||||||
BSU35860___pg 431 AAAGCAGCTATTGGAGCGGAACTTATATCGGGGCGAGACGAATCGCTGCC 480
BSNT_05468___ 601 GATCCGGCAACGGCTGATGTTCCTGTCGTTCAGGAGGCCGAAAAATATAT 650
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU35860___pg 481 GATCCGGCAACGGCTGATGTTCCTGTCGTTCAGGAGGCCGAAAAATATAT 530
BSNT_05468___ 651 CGGTGTCCCATATGTGTTTGGCGGAAGCACGCCGTCAGAGGGCTTTGATT 700
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU35860___pg 531 CGGTGTCCCATATGTGTTTGGCGGAAGCACGCCGTCAGAGGGCTTTGATT 580
BSNT_05468___ 701 GCTCGGGGCTTGTGCAATATGTGTTTCAACAGGCACTCGGCATTTATCTG 750
|||||||||||||||||||||||||||||||||||||||||||||||||.
BSU35860___pg 581 GCTCGGGGCTTGTGCAATATGTGTTTCAACAGGCACTCGGCATTTATCTA 630
BSNT_05468___ 751 CCGCGATCAGCCGAACAGCAGTGGGCAGTGGGCGAGAAGATAGCCCCTCA 800
|||||||||||||||||||||||||||||||||||||||.||||||||||
BSU35860___pg 631 CCGCGATCAGCCGAACAGCAGTGGGCAGTGGGCGAGAAGGTAGCCCCTCA 680
BSNT_05468___ 801 GAACATAAAGCCTGGTGATGTCGTCTATTTCAGCAATACGTATAAAACGG 850
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU35860___pg 681 GAACATAAAGCCTGGTGATGTCGTCTATTTCAGCAATACGTATAAAACGG 730
BSNT_05468___ 851 GAATTTCACATGCAGGCATTTATGCGGGCGCAGGCAGGTTCATCCAGGCG 900
|||||||||||||||||||||||||||||||||||||||||||.|||||.
BSU35860___pg 731 GAATTTCACATGCAGGCATTTATGCGGGCGCAGGCAGGTTCATTCAGGCA 780
BSNT_05468___ 901 AGCAGGTCAGAAAAAGTAACCATTTCCTATTTGTCAGAGGATTACTGGAA 950
|||.||||||||||||||||||||||||||||||||||||||||||||||
BSU35860___pg 781 AGCCGGTCAGAAAAAGTAACCATTTCCTATTTGTCAGAGGATTACTGGAA 830
BSNT_05468___ 951 ATCGAAGATGACGGGTATTCGCCGATTTGACAACCTGACAATCCCGAAAG 1000
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU35860___pg 831 ATCGAAGATGACGGGTATTCGCCGATTTGACAACCTGACAATCCCGAAAG 880
BSNT_05468___ 1001 AAAATCCGATTGTTTCCGAAGCGACGCTTTATGTCGGAGAAGTGCCTTAC 1050
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU35860___pg 881 AAAATCCGATTGTTTCCGAAGCGACGCTTTATGTCGGAGAAGTGCCTTAC 930
BSNT_05468___ 1051 AAACAGGGCGGAGTAACACCTGAGACAGGATTTGATACAGCTGGATTTGT 1100
||||||||||||||||||||||||||.|||||||||||||||||||||||
BSU35860___pg 931 AAACAGGGCGGAGTAACACCTGAGACGGGATTTGATACAGCTGGATTTGT 980
BSNT_05468___ 1101 CCAATATGTATACCAGAAAGCAGCCGGTATTTCCCTGCCTCGATACGCAA 1150
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU35860___pg 981 CCAATATGTATACCAGAAAGCAGCCGGTATTTCCCTGCCTCGATACGCAA 1030
BSNT_05468___ 1151 CAAGCCAGTACAATGCCGGAACTAAGATTAAGAAGGCGGACCTGAAGCCG 1200
|||||||||||||||||||||||||||||.||||||||||||||||||||
BSU35860___pg 1031 CAAGCCAGTACAATGCCGGAACTAAGATTGAGAAGGCGGACCTGAAGCCG 1080
BSNT_05468___ 1201 GGAGACATTGTGTTCTTTCAATCAACAAGCTTAAATCCCTCCATCTATAT 1250
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU35860___pg 1081 GGAGACATTGTGTTCTTTCAATCAACAAGCTTAAATCCCTCCATCTATAT 1130
BSNT_05468___ 1251 CGGAAACGGACAAGTTGTTCATGTCACATTATCAAACGGCGTGACCATCA 1300
||||||||||||||||||||||||||||||||||||||||||||||||.|
BSU35860___pg 1131 CGGAAACGGACAAGTTGTTCATGTCACATTATCAAACGGCGTGACCATTA 1180
BSNT_05468___ 1301 CCAATATGAACACGAGCACATATTGGAAGGATAAATACGCAGGAAGTATA 1350
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU35860___pg 1181 CCAATATGAACACGAGCACATATTGGAAGGATAAATACGCAGGAAGTATA 1230
BSNT_05468___ 1351 CGAGTGCAATAA 1362
||.|||||||||
BSU35860___pg 1231 CGGGTGCAATAA 1242
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