Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_05468 and BSU35860

See Amino acid alignment / Visit BSNT_05468 in genome browser / Return to Orthologue table
########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:26:23
# Commandline: needle
#    -asequence dna-align/BSNT_05468___ywtD.1.22522.seq
#    -bsequence dna-align/BSU35860___pgdS.2.22522.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_05468___ywtD-BSU35860___pgdS.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_05468___ywtD-BSU35860___pgdS.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05468___ywtD
# 2: BSU35860___pgdS
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1362
# Identity:    1228/1362 (90.2%)
# Similarity:  1228/1362 (90.2%)
# Gaps:         120/1362 ( 8.8%)
# Score: 6084.0
# 
#
#=======================================

BSNT_05468___      1 ATGAGACACTCTCTTTTTATTTGCCCAGCATATTCATTCTGTAAAAATAT     50
                                                                       
BSU35860___pg      0 --------------------------------------------------      0

BSNT_05468___     51 CAAAAAGTCTCTTAACATATTCAAAAAAATACCGATGTTAAAACTGCAAA    100
                                                                       
BSU35860___pg      0 --------------------------------------------------      0

BSNT_05468___    101 AAGAGGAGGAGATAATAAAAGTGAACACACTGGCAAACTGGAAGAAGTTT    150
                                         ||||||||||||||||||||||||||||||
BSU35860___pg      1 --------------------GTGAACACACTGGCAAACTGGAAGAAGTTT     30

BSNT_05468___    151 TTGCTTGTGGCGGTTATCATTTGTTTTTTGGTTCCAATTATGACAAAAGC    200
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU35860___pg     31 TTGCTTGTGGCGGTTATCATTTGTTTTTTGGTTCCAATTATGACAAAAGC     80

BSNT_05468___    201 GGAGATTGCGGAAGCTGATACATCATCAGAATTGATTGTCAGCGAAGCAA    250
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU35860___pg     81 GGAGATTGCGGAAGCTGATACATCATCAGAATTGATTGTCAGCGAAGCAA    130

BSNT_05468___    251 AAAACCTGCTTGGATATCAGTATAAATATGGCGGGGAAACGCCGAAAGAG    300
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU35860___pg    131 AAAACCTGCTTGGATATCAGTATAAATATGGCGGGGAAACGCCGAAAGAG    180

BSNT_05468___    301 GGTTTCGATCCATCAGGATTGATACAATATGTGTTCAGTAAGGCTGATAT    350
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU35860___pg    181 GGTTTCGATCCATCAGGATTGATACAATATGTGTTCAGTAAGGCTGATAT    230

BSNT_05468___    351 TCATCTGCCGAGATCTGTAAACGACCAGTATAAAATCGGAACAGCTGTAA    400
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU35860___pg    231 TCATCTGCCGAGATCTGTAAACGACCAGTATAAAATCGGAACAGCTGTAA    280

BSNT_05468___    401 AGCCGGAAAACCTGAAGCCGGGTGATATTTTGTTTTTCAAGAAAGAGGGA    450
                     |.||||||||||||||||||||||||||||||||||||||||||||||||
BSU35860___pg    281 AACCGGAAAACCTGAAGCCGGGTGATATTTTGTTTTTCAAGAAAGAGGGA    330

BSNT_05468___    451 AGCAACGGCTCTGTTCCGACACATGACGCCCTTTATATCGGAGACGGCCA    500
                     ||||.||||.||||||||||||||||||||||||||||||||||||||||
BSU35860___pg    331 AGCACCGGCACTGTTCCGACACATGACGCCCTTTATATCGGAGACGGCCA    380

BSNT_05468___    501 AATGGTACACAGTACACAGTCAAAAGGGGTTATCATCACCAATTACAAAA    550
                     ||||||.|||||||||||||||||||||||||||||||||||||||||||
BSU35860___pg    381 AATGGTTCACAGTACACAGTCAAAAGGGGTTATCATCACCAATTACAAAA    430

BSNT_05468___    551 AAAGCAGCTATTGGAGCGGAACTTATATCGGAGCGAGACGAATCGCTGCC    600
                     |||||||||||||||||||||||||||||||.||||||||||||||||||
BSU35860___pg    431 AAAGCAGCTATTGGAGCGGAACTTATATCGGGGCGAGACGAATCGCTGCC    480

BSNT_05468___    601 GATCCGGCAACGGCTGATGTTCCTGTCGTTCAGGAGGCCGAAAAATATAT    650
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU35860___pg    481 GATCCGGCAACGGCTGATGTTCCTGTCGTTCAGGAGGCCGAAAAATATAT    530

BSNT_05468___    651 CGGTGTCCCATATGTGTTTGGCGGAAGCACGCCGTCAGAGGGCTTTGATT    700
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU35860___pg    531 CGGTGTCCCATATGTGTTTGGCGGAAGCACGCCGTCAGAGGGCTTTGATT    580

BSNT_05468___    701 GCTCGGGGCTTGTGCAATATGTGTTTCAACAGGCACTCGGCATTTATCTG    750
                     |||||||||||||||||||||||||||||||||||||||||||||||||.
BSU35860___pg    581 GCTCGGGGCTTGTGCAATATGTGTTTCAACAGGCACTCGGCATTTATCTA    630

BSNT_05468___    751 CCGCGATCAGCCGAACAGCAGTGGGCAGTGGGCGAGAAGATAGCCCCTCA    800
                     |||||||||||||||||||||||||||||||||||||||.||||||||||
BSU35860___pg    631 CCGCGATCAGCCGAACAGCAGTGGGCAGTGGGCGAGAAGGTAGCCCCTCA    680

BSNT_05468___    801 GAACATAAAGCCTGGTGATGTCGTCTATTTCAGCAATACGTATAAAACGG    850
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU35860___pg    681 GAACATAAAGCCTGGTGATGTCGTCTATTTCAGCAATACGTATAAAACGG    730

BSNT_05468___    851 GAATTTCACATGCAGGCATTTATGCGGGCGCAGGCAGGTTCATCCAGGCG    900
                     |||||||||||||||||||||||||||||||||||||||||||.|||||.
BSU35860___pg    731 GAATTTCACATGCAGGCATTTATGCGGGCGCAGGCAGGTTCATTCAGGCA    780

BSNT_05468___    901 AGCAGGTCAGAAAAAGTAACCATTTCCTATTTGTCAGAGGATTACTGGAA    950
                     |||.||||||||||||||||||||||||||||||||||||||||||||||
BSU35860___pg    781 AGCCGGTCAGAAAAAGTAACCATTTCCTATTTGTCAGAGGATTACTGGAA    830

BSNT_05468___    951 ATCGAAGATGACGGGTATTCGCCGATTTGACAACCTGACAATCCCGAAAG   1000
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU35860___pg    831 ATCGAAGATGACGGGTATTCGCCGATTTGACAACCTGACAATCCCGAAAG    880

BSNT_05468___   1001 AAAATCCGATTGTTTCCGAAGCGACGCTTTATGTCGGAGAAGTGCCTTAC   1050
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU35860___pg    881 AAAATCCGATTGTTTCCGAAGCGACGCTTTATGTCGGAGAAGTGCCTTAC    930

BSNT_05468___   1051 AAACAGGGCGGAGTAACACCTGAGACAGGATTTGATACAGCTGGATTTGT   1100
                     ||||||||||||||||||||||||||.|||||||||||||||||||||||
BSU35860___pg    931 AAACAGGGCGGAGTAACACCTGAGACGGGATTTGATACAGCTGGATTTGT    980

BSNT_05468___   1101 CCAATATGTATACCAGAAAGCAGCCGGTATTTCCCTGCCTCGATACGCAA   1150
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU35860___pg    981 CCAATATGTATACCAGAAAGCAGCCGGTATTTCCCTGCCTCGATACGCAA   1030

BSNT_05468___   1151 CAAGCCAGTACAATGCCGGAACTAAGATTAAGAAGGCGGACCTGAAGCCG   1200
                     |||||||||||||||||||||||||||||.||||||||||||||||||||
BSU35860___pg   1031 CAAGCCAGTACAATGCCGGAACTAAGATTGAGAAGGCGGACCTGAAGCCG   1080

BSNT_05468___   1201 GGAGACATTGTGTTCTTTCAATCAACAAGCTTAAATCCCTCCATCTATAT   1250
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU35860___pg   1081 GGAGACATTGTGTTCTTTCAATCAACAAGCTTAAATCCCTCCATCTATAT   1130

BSNT_05468___   1251 CGGAAACGGACAAGTTGTTCATGTCACATTATCAAACGGCGTGACCATCA   1300
                     ||||||||||||||||||||||||||||||||||||||||||||||||.|
BSU35860___pg   1131 CGGAAACGGACAAGTTGTTCATGTCACATTATCAAACGGCGTGACCATTA   1180

BSNT_05468___   1301 CCAATATGAACACGAGCACATATTGGAAGGATAAATACGCAGGAAGTATA   1350
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU35860___pg   1181 CCAATATGAACACGAGCACATATTGGAAGGATAAATACGCAGGAAGTATA   1230

BSNT_05468___   1351 CGAGTGCAATAA   1362
                     ||.|||||||||
BSU35860___pg   1231 CGGGTGCAATAA   1242


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