Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_05466 and BSU35850

See Amino acid alignment / Visit BSNT_05466 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:26:23
# Commandline: needle
#    -asequence dna-align/BSNT_05466___ywtE.1.22522.seq
#    -bsequence dna-align/BSU35850___ywtE.2.22522.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_05466___ywtE-BSU35850___ywtE.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_05466___ywtE-BSU35850___ywtE.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05466___ywtE
# 2: BSU35850___ywtE
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 861
# Identity:     833/861 (96.7%)
# Similarity:   833/861 (96.7%)
# Gaps:           0/861 ( 0.0%)
# Score: 4053.0
# 
#
#=======================================

BSNT_05466___      1 ATGAAATGTATTGCGATTGATCTAGACGGAACATTACTGAATAAAGAAAG     50
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU35850___yw      1 ATGAAATGTATTGCGATTGATCTAGACGGAACATTACTGAATAAAGAAAG     50

BSNT_05466___     51 CGTCATTTCTGCGGAAAACAGAGAGGCGATCAAGCGGGCCGTTGATGCCG    100
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU35850___yw     51 CGTCATTTCTGCGGAAAACAGAGAGGCGATCAAGCGGGCCGTTGATGCCG    100

BSNT_05466___    101 GCATCCTCGTCACCATTTGCACGGGAAGAGCGACATTTGATGTAAAGGCG    150
                     ||||||||||||||||||||||||||||||||||||||||||||||.|||
BSU35850___yw    101 GCATCCTCGTCACCATTTGCACGGGAAGAGCGACATTTGATGTAAAAGCG    150

BSNT_05466___    151 CTGCTGGATGACTTGGACATCCCTATCATTGCAGCTAATGGCGGTACGAT    200
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU35850___yw    151 CTGCTGGATGACTTGGACATCCCTATCATTGCAGCTAATGGCGGTACGAT    200

BSNT_05466___    201 CCATGACACGGGTTACCGTTTGATAAGCCGGACATTAATGGATCAGGAAG    250
                     |||.||||||||||||||||||||.|||||||||||||||||||||||||
BSU35850___yw    201 CCACGACACGGGTTACCGTTTGATCAGCCGGACATTAATGGATCAGGAAG    250

BSNT_05466___    251 CCGGCAAAGCGATTGCTGATTACTTACTGTCAAAAAACATTTACTTTGAG    300
                     ||||.|||||||||||||||||||||||.|||||||||||||||||||||
BSU35850___yw    251 CCGGTAAAGCGATTGCTGATTACTTACTTTCAAAAAACATTTACTTTGAG    300

BSNT_05466___    301 GTATATACAGATGACCATCTGCTTTCTCCTTTTGACGGCAAAGCTAAGCT    350
                     |||||||||||||||||||||||||||||||||||||||.||||||||||
BSU35850___yw    301 GTATATACAGATGACCATCTGCTTTCTCCTTTTGACGGCGAAGCTAAGCT    350

BSNT_05466___    351 GCACGCGGAGCTAGACATTCTAAAGAGCGCAAATCCAAACGAGCAGACAG    400
                     ||||||||||||.||||||||||||||||||||.||||||||||||||.|
BSU35850___yw    351 GCACGCGGAGCTTGACATTCTAAAGAGCGCAAACCCAAACGAGCAGACGG    400

BSNT_05466___    401 ATGAACTGTGGCAAGGAGCCATGACTCAATTCAAGCAATTTGGAATTAAA    450
                     ||||..||||||||||||||||||||||||||||.||.|||||.||||||
BSU35850___yw    401 ATGACTTGTGGCAAGGAGCCATGACTCAATTCAAACAGTTTGGCATTAAA    450

BSNT_05466___    451 CCAATCCCTCATATCGAATCTGTTTTTGAGGGCGGTGAAAATATTTATAA    500
                     ||||||||||||||||||||.||||||||.|||||||||||.||||||||
BSU35850___yw    451 CCAATCCCTCATATCGAATCGGTTTTTGACGGCGGTGAAAACATTTATAA    500

BSNT_05466___    501 GCTTCTATGCTTCTCCTTTGATATGGACAAGCTGAAACAAGCGAAGGAAG    550
                     ||||||.|||||||||||||||||||||||||||||||||||||||||||
BSU35850___yw    501 GCTTCTTTGCTTCTCCTTTGATATGGACAAGCTGAAACAAGCGAAGGAAG    550

BSNT_05466___    551 AGCTGAAGCATCATAAAAAACTGGCGCAAACCTCTTCCGGAAAACATATT    600
                     |.|||||||||||||||||||||||||||||||||||.||||||||||||
BSU35850___yw    551 AACTGAAGCATCATAAAAAACTGGCGCAAACCTCTTCAGGAAAACATATT    600

BSNT_05466___    601 ATTGAAATCCTGCCGGCCTCTTCAGGAAAAGGACGCGCGTTAACAAAGCT    650
                     ||.|||||||||||||||||.|||||||||||||||||||||||||||||
BSU35850___yw    601 ATCGAAATCCTGCCGGCCTCGTCAGGAAAAGGACGCGCGTTAACAAAGCT    650

BSNT_05466___    651 GGCTGACATATACGGAATTGAAACACAGGATATCTATGCGATCGGCGACA    700
                     ||||||||||||||||||||||||||||||||||||||||||||||||.|
BSU35850___yw    651 GGCTGACATATACGGAATTGAAACACAGGATATCTATGCGATCGGCGATA    700

BSNT_05466___    701 GTCCGAACGATTTGTCCATGTTTGAAGTCTCAGGACACCGTATCGCCATG    750
                     ||||.||||||||||||||||||||||||.|.||||||||||||||||||
BSU35850___yw    701 GTCCAAACGATTTGTCCATGTTTGAAGTCGCCGGACACCGTATCGCCATG    750

BSNT_05466___    751 GAAAATGCGATTGATGAATTAAAAGAAAAAAGCACCTTTGTCACAAAAAG    800
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU35850___yw    751 GAAAATGCGATTGATGAATTAAAAGAAAAAAGCACCTTTGTCACAAAAAG    800

BSNT_05466___    801 CAATGACGAAAATGGTGTGGCCTACTTTATAGACCAGCTTCTTTCAGGAC    850
                     |||||||||||||||||||||||||||||||||||||||||||||.||.|
BSU35850___yw    801 CAATGACGAAAATGGTGTGGCCTACTTTATAGACCAGCTTCTTTCGGGGC    850

BSNT_05466___    851 AATATGCATAA    861
                     |||||||||||
BSU35850___yw    851 AATATGCATAA    861


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