Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_05460 and BSU35810
See
Amino acid alignment /
Visit
BSNT_05460 in genome browser /
Return to
Orthologue table
########################################
# Program: needle
# Rundate: Mon 8 Mar 2010 06:26:22
# Commandline: needle
# -asequence dna-align/BSNT_05460___gerBB.1.22522.seq
# -bsequence dna-align/BSU35810___gerBB.2.22522.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_05460___gerBB-BSU35810___gerBB.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_05460___gerBB-BSU35810___gerBB.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05460___gerBB
# 2: BSU35810___gerBB
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1116
# Identity: 910/1116 (81.5%)
# Similarity: 910/1116 (81.5%)
# Gaps: 18/1116 ( 1.6%)
# Score: 3703.5
#
#
#=======================================
BSNT_05460___ 1 ATGAGGCAATCAGAGGACAAGCTTACATTTATGCAGACGCTTATTATGGT 50
||||||.||||||||.|.||.||.|||||||||||||||||.||||||.|
BSU35810___ge 1 ATGAGGAAATCAGAGCATAAACTGACATTTATGCAGACGCTCATTATGAT 50
BSNT_05460___ 51 AAGCAGTACAATGATCGGTGCTGGCGTCTTAACCCTTTCCCGCTCAGCCG 100
.|||||.|||.||||.|||||.||.||..|.||||||.||||||||||||
BSU35810___ge 51 CAGCAGCACATTGATTGGTGCCGGGGTGCTGACCCTTCCCCGCTCAGCCG 100
BSNT_05460___ 101 CTGAAACCGACAGTCCGATTGGATGGATCATGATCCTGCTGCAGGGCGTT 150
|.|||||||.||||||||..||||||.|.|||||.|||||.|||||||||
BSU35810___ge 101 CCGAAACCGGCAGTCCGAGCGGATGGCTAATGATACTGCTCCAGGGCGTT 150
BSNT_05460___ 151 ATTTTTATTATTTTTTCTCTGCTTTTTTTGCCTTTTCTTCAACGAAACAG 200
|||||||||||..|...|||||||||||||||||||||||||..||||||
BSU35810___ge 151 ATTTTTATTATCATCGTTCTGCTTTTTTTGCCTTTTCTTCAAAAAAACAG 200
BSNT_05460___ 201 CGGGAAAACGATTTTTGAGCTCAACAGCATTGCAGCGGGAAAAGTGGTTG 250
|||.|||||..|||||.|||||||||||||||.|||.||||||.|..|.|
BSU35810___ge 201 CGGAAAAACTCTTTTTAAGCTCAACAGCATTGTAGCTGGAAAATTCATCG 250
BSNT_05460___ 251 G-TTTCTTTTTGAATGTATTTATTTCCCTGTATTTTATCGGTATCGTATG 299
| |||| |.||||||.|||.|||.|..||.|||||.||.||.||.||.||
BSU35810___ge 251 GCTTTC-TATTGAATTTATATATCTGTCTATATTTCATTGGGATTGTTTG 299
BSNT_05460___ 300 TTTTCAGACACGGATTTTAGGCGAGGTTGTCGGATTCTTTCTTTTAAAAA 349
.|||||..|.||||||||.||.||||||||||||||||||.|.||.||||
BSU35810___ge 300 CTTTCAAGCTCGGATTTTGGGAGAGGTTGTCGGATTCTTTTTGTTGAAAA 349
BSNT_05460___ 350 ACACACCGATGGCGGTTGTTGTGATCATTTTTCTGGCAGTTGCCATTTAT 399
|.||.||.|||||.|||||.|||.|.||.|||||.|||||||||||.|||
BSU35810___ge 350 ATACGCCAATGGCAGTTGTGGTGTTTATATTTCTTGCAGTTGCCATCTAT 399
BSNT_05460___ 400 CATGT-GGCTGGGGGCGTATACCCCATTGCAAAGGTATATGCATATATCT 448
||||| ||| ||.|||||.||..|.||||||||.|||||.||.|||||.|
BSU35810___ge 400 CATGTAGGC-GGAGGCGTTTATTCAATTGCAAAAGTATACGCTTATATTT 448
BSNT_05460___ 449 TCCCTATTACAATTATTATTTTTCTCATGCTTTTGATGTTTAGCTTTCGT 498
|.|||||.||..|||||||||||.|.||||||.|||||||.||||||||.
BSU35810___ge 449 TTCCTATAACCCTTATTATTTTTATGATGCTTCTGATGTTCAGCTTTCGC 498
BSNT_05460___ 499 TTGTTTCAGTTAGATTTTATACGGCCCGTTTTTGAAGGCGGCTTTCAAAG 548
|||||.|||.|.||||||||.|||||.||.||||||||.||||.||||||
BSU35810___ge 499 TTGTTCCAGCTTGATTTTATCCGGCCGGTATTTGAAGGAGGCTATCAAAG 548
BSNT_05460___ 549 TTTTTTTTCTTTATTTCCTAAAACCCTTTTATATTTTTCTGGATTTGAAA 598
.|||||.||||||||.||.|||||..|.||||||||.||.||||||||||
BSU35810___ge 549 CTTTTTCTCTTTATTCCCAAAAACATTATTATATTTCTCCGGATTTGAAA 598
BSNT_05460___ 599 TTATTTTTTATCTCGTTCCCTTTATGAAAGATCCAAAGCAGGTAAAAAAA 648
|.||||||||.||.||.||||||||||.||||||||||||.||.|||||.
BSU35810___ge 599 TCATTTTTTACCTGGTCCCCTTTATGAGAGATCCAAAGCAAGTGAAAAAG 648
BSNT_05460___ 649 GCTGTCGCCTTTGGTATTGTAACCTCAACTGTTTTCTACAGCATTACTTT 698
|||||.||..|.||.||.|..||.||.||..|.|||||||||||||||||
BSU35810___ge 649 GCTGTTGCTCTGGGCATCGCGACTTCCACATTGTTCTACAGCATTACTTT 698
BSNT_05460___ 699 GTTTATTGTCATTGGCTGTATGAGTGTGGCTGAGGCAAAAACAGTGACGT 748
|.|.|||||.|||||||||||||.||||||||||||||||||.|||||.|
BSU35810___ge 699 GCTCATTGTGATTGGCTGTATGACTGTGGCTGAGGCAAAAACGGTGACAT 748
BSNT_05460___ 749 GGCCGACGATTTCACTCATTCATGCATTAGAAATCCCGGGCATTTTTATT 798
|||||||.|||||.||.|||||.||||||||..|.|||||.|||||||||
BSU35810___ge 749 GGCCGACCATTTCCCTTATTCACGCATTAGAGGTTCCGGGTATTTTTATT 798
BSNT_05460___ 799 GAACGGTTTGACCTGTTTTTACAGTTAACTTGGACAGCACAGCAATTTGC 848
|||||.|||||..||||.||||||.|.||.||||||||.|||||||||||
BSU35810___ge 799 GAACGATTTGATTTGTTCTTACAGCTGACCTGGACAGCCCAGCAATTTGC 848
BSNT_05460___ 849 ATGTATGCTCGGCTCCTTTAAAGGGGCGCATATCGGATTAACAGATATCT 898
.|||||||||||.|||||||||||.||.||||||||.|||||.||.||||
BSU35810___ge 849 CTGTATGCTCGGATCCTTTAAAGGCGCCCATATCGGGTTAACGGAAATCT 898
BSNT_05460___ 899 TCCACCTGAAAAATAAAAACAATCCTTGGCTGCTTACTGCATTGCTGGCT 948
|.||.||.|||||||||||||||.|.||||||||.||||||.||||||||
BSU35810___ge 899 TTCATCTAAAAAATAAAAACAATGCATGGCTGCTGACTGCAATGCTGGCT 948
BSNT_05460___ 949 GTTACATTTTTTCTATCAATGTTTCCTGAAGATCTT-AATGCCGTGTTTT 997
|..||.|||||..||.|.||||.||| .|||..||| ||||.||||||||
BSU35810___ge 949 GCGACGTTTTTCATAACGATGTATCC-CAAGGACTTGAATGACGTGTTTT 997
BSNT_05460___ 998 ATTACGGTACACTTCTCGGATATATATTTCTAGGCATCATTGT------A 1041
|||||||.||.|||||.|||||| ..||||| |.||||| |
BSU35810___ge 998 ATTACGGGACGCTTCTTGGATAT-GCTTTCT-----TAATTGTGATTACA 1041
BSNT_05460___ 1042 ATACCATTTTTCATCTGGTTTTTAAGCTGGATACAGAAAAAACTGGGGAG 1091
||.|||||.|||.|||||||||||||||||||||||||||||.|.|||||
BSU35810___ge 1042 ATTCCATTCTTCGTCTGGTTTTTAAGCTGGATACAGAAAAAAATAGGGAG 1091
BSNT_05460___ 1092 GGGGCAGCTGCAATGA 1107
||||||||||||||||
BSU35810___ge 1092 GGGGCAGCTGCAATGA 1107
#---------------------------------------
#---------------------------------------
Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.